Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC095050.2-201ENST00000510748 1458 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 SPRR2C-201ENST00000290702 219 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 RNU6-213P-201ENST00000384051 104 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 RPL21P109-201ENST00000422213 475 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 OR8F1P-201ENST00000425243 930 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AL117339.2-201ENST00000430475 180 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 CACYBPP1-201ENST00000438592 684 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 HSFY6P-201ENST00000445573 403 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 RNU6-1218P-201ENST00000458990 108 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC114982.2-201ENST00000461396 358 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 TPT1P3-201ENST00000492841 512 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC092045.1-201ENST00000495716 1231 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC010627.1-201ENST00000503819 1294 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC022695.1-201ENST00000522089 237 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC005255.1-201ENST00000593748 216 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 PSMA6P4-201ENST00000603247 718 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 MIR6748-201ENST00000610433 71 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC244205.2-202ENST00000635781 342 ntBASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS29Q9UBQ0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC027287.1-201ENST00000553115 1453 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 U1.1-201ENST00000384101 164 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 SNORA3.3-201ENST00000408712 125 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 TRGV7-201ENST00000427089 353 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 C4BPAP2-201ENST00000428434 478 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 FTH1P6-201ENST00000430768 320 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 BTG3P1-201ENST00000435859 716 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 EXTL2P1-201ENST00000446218 416 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 OR9M1P-201ENST00000459641 921 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 RPL21P71-201ENST00000465598 459 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 STRADBP1-201ENST00000478954 1281 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC020593.1-201ENST00000507399 299 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 RN7SKP83-201ENST00000516512 178 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC006960.3-201ENST00000561845 705 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 VN1R84P-201ENST00000593697 235 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 SNORA62.6-201ENST00000606322 83 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AL592494.3-201ENST00000609485 464 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC083809.1-201ENST00000615051 472 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 AC009452.1-201ENST00000640823 606 ntBASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS29Q9UBQ0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 MIR372-201ENST00000362225 67 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC068538.1-201ENST00000376856 336 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 MIR92A2-201ENST00000385299 75 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms