Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC104260.2-201ENST00000623551 3497 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC092376.2-201ENST00000622621 4116 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 SNURFL-201ENST00000309296 343 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 RNU4-44P-201ENST00000363050 141 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 MIR1182-201ENST00000408363 97 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC079809.1-201ENST00000415468 276 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 RPS6P15-201ENST00000431996 751 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 TMX2P1-201ENST00000436507 708 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 MED28P3-201ENST00000444288 531 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC108463.1-201ENST00000450258 347 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 BX276092.4-201ENST00000452056 248 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 TRBV26-201ENST00000456572 344 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC069304.1-201ENST00000491593 704 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 IGBP1P4-201ENST00000503202 879 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 HMGB1P28-201ENST00000507778 552 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 RN7SKP277-201ENST00000516895 283 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 RN7SKP260-201ENST00000516907 149 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AP001922.4-201ENST00000526967 290 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 RN7SL802P-201ENST00000577858 299 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 ELOCP28-201ENST00000590044 317 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC008751.2-201ENST00000597885 980 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC108738.1-201ENST00000603703 237 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC025811.1-201ENST00000604312 472 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC090246.1-201ENST00000616499 426 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC091304.6-201ENST00000619761 202 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AL353662.3-201ENST00000625131 237 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 ZNF33CP-201ENST00000432492 2030 ntBASIC4.78□□□□□ -1.64
LRFN1Q9P244 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN1Q9P244 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN1Q9P244 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN1Q9P244 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 IL6STP1-201ENST00000346911 1020 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 GLULP6-201ENST00000399502 913 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AL023807.1-201ENST00000407932 359 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC073264.1-201ENST00000411508 416 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 DDX39BP1-205ENST00000422507 192 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 EI24P4-201ENST00000423683 1078 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC012519.1-201ENST00000424588 610 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC124944.2-201ENST00000429866 1242 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 MRPL48P1-201ENST00000445390 636 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 MTCYBP11-201ENST00000447254 1109 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 IGHV5-78-201ENST00000450948 295 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 RPS24P16-201ENST00000497294 392 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC110775.1-201ENST00000513721 462 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC006427.1-201ENST00000514359 712 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 OR5AZ1P-201ENST00000527448 943 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC002400.1-201ENST00000569310 726 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 MIR7853-201ENST00000584820 132 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms