Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC244107.2-201ENST00000611773 76 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 AL161616.1-201ENST00000611867 286 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 AC007014.2-201ENST00000615581 479 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 MIR7703-201ENST00000620784 77 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 uc_338.7-201ENST00000621834 124 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 AP003400.3-201ENST00000624904 346 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 PABPC1P9-201ENST00000426076 1612 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 MFSD8-216ENST00000641147 4009 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 AC093775.1-201ENST00000624154 1868 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 THAP12P4-201ENST00000528321 2266 ntBASIC5.94□□□□□ -1.46
PDLIM7Q9NR12 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC015799.1-201ENST00000622996 3122 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 RNU6-1339P-201ENST00000363574 91 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 RN7SKP113-201ENST00000363891 295 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 Y_RNA.302-201ENST00000364997 102 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 RNU6-398P-201ENST00000384143 109 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 RNU6-761P-201ENST00000384148 107 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 RNU6-77P-201ENST00000410554 91 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC138761.5-201ENST00000433967 325 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 TPT1P12-201ENST00000448968 492 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 PNPLA4P1-201ENST00000458328 305 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC074344.1-201ENST00000512823 224 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 RN7SKP298-201ENST00000515950 94 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 IGJP1-201ENST00000522682 475 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 DEFB108A-201ENST00000530110 222 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AP005262.1-201ENST00000582646 997 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 MIR548AB-201ENST00000584917 84 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 VN1R92P-201ENST00000598511 928 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC012065.4-201ENST00000602445 679 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AL157786.1-207ENST00000627771 695 ntBASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM7Q9NR12 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 AC092681.1-201ENST00000297369 291 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 SNORA62-201ENST00000365493 153 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 SNORD56.6-201ENST00000384569 71 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 RNU6-114P-201ENST00000384704 105 ntBASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDLIM7Q9NR12 RN7SKP222-201ENST00000410651 315 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms