Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 KCTD9P2-201ENST00000512203 1013 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 PTP4A1P6-201ENST00000531034 478 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AP002812.4-201ENST00000532139 286 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 ZNF92P3-201ENST00000596594 954 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AP003117.2-201ENST00000606010 545 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AP002360.3-201ENST00000607673 710 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AC110792.4-201ENST00000609843 298 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 FAM27D1-201ENST00000612308 341 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AL021997.2-201ENST00000615674 271 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 MIR4727-201ENST00000622232 55 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AL445363.3-201ENST00000623080 671 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AL356121.2-201ENST00000624715 780 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
TM9SF3Q9HD45 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 SNORD74.4-201ENST00000364129 80 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 VN1R8P-201ENST00000407739 893 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 RN7SKP235-201ENST00000410662 305 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 RN7SKP33-201ENST00000410942 340 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 PRELID3BP11-201ENST00000414230 479 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AL691447.1-201ENST00000419456 387 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 MRPL50P1-201ENST00000431951 384 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC023347.2-201ENST00000433994 462 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 XKRYP6-201ENST00000440468 1116 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 XKRYP3-201ENST00000442113 1116 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 RPL21P89-201ENST00000444021 467 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AL451050.1-201ENST00000450126 415 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 VN1R32P-201ENST00000452234 905 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 RPL5P32-201ENST00000454085 879 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 RPL35AP15-201ENST00000468042 339 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 RPL21P103-201ENST00000479921 488 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 HMGB1P3-201ENST00000502802 616 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AL592156.1-201ENST00000508758 304 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC006499.6-201ENST00000511169 607 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC108064.1-201ENST00000513791 460 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 MTND4LP31-201ENST00000514859 294 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC090281.1-201ENST00000523019 276 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 LLPHP1-201ENST00000603571 367 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC245389.1-201ENST00000605141 529 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 AL138721.1-201ENST00000616756 179 ntBASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TM9SF3Q9HD45 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AC067945.1-201ENST00000342609 618 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 RNA5SP39-201ENST00000411245 120 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 OR8G2P-201ENST00000412796 908 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AC234782.4-201ENST00000417646 1048 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AC062016.2-201ENST00000420950 676 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 NANOGP6-201ENST00000429190 847 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AL162151.2-201ENST00000448875 158 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 SUMO1P1-201ENST00000497904 306 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AC093770.1-201ENST00000511559 571 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 IGHV3-32-201ENST00000519182 355 ntBASIC4.26□□□□□ -1.73
TM9SF3Q9HD45 IGKV2-36-201ENST00000519999 223 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms