Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC023813.2-201ENST00000564321 469 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 MTCYBP28-201ENST00000566728 1132 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 MTATP6P24-201ENST00000576835 677 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 MIR3912-201ENST00000577566 105 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC113368.1-201ENST00000603736 382 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 IMMP1LP1-201ENST00000605170 488 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC016877.3-201ENST00000606778 504 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC140725.3-201ENST00000616193 880 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AL158163.2-201ENST00000619110 700 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AP006248.2-201ENST00000623309 592 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 INTS6P1-201ENST00000504674 2530 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AL672167.1-205ENST00000641112 3080 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 NEAT1-202ENST00000501122 22743 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 NCLP2-201ENST00000416078 1462 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 snoZ40.1-201ENST00000364540 72 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 MIR217-201ENST00000384817 110 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AL590762.2-201ENST00000395798 571 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 RPL23AP27-201ENST00000415161 451 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 RPS3AP9-201ENST00000417027 792 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 GTF2IP23-201ENST00000423746 351 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 RBMY2QP-201ENST00000429799 1147 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 PTENP1-201ENST00000447117 1215 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC007327.1-201ENST00000447461 264 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC087879.1-201ENST00000474343 374 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC025164.1-201ENST00000496249 478 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC008033.2-201ENST00000542626 177 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC133555.2-201ENST00000550213 292 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC098935.2-201ENST00000604222 466 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 SNORD91B-202ENST00000608459 222 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC024257.5-201ENST00000612739 531 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AL512624.1-201ENST00000613638 469 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 AC008147.4-201ENST00000617570 1204 ntBASIC4.56□□□□□ -1.68
BRF2Q9HAW0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRF2Q9HAW0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AP005901.5-201ENST00000545779 1796 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 MTND5P31-201ENST00000419366 1374 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 DCAF13P3-201ENST00000561147 1334 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RNU6-582P-201ENST00000362989 107 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RNU6-1066P-201ENST00000363573 105 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RN7SKP269-201ENST00000365545 319 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 SNORA40.2-201ENST00000390847 128 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AL080315.1-201ENST00000406055 466 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RNU2-21P-201ENST00000410368 188 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms