Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC124312.4-201ENST00000605533 310 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 RN7SL853P-201ENST00000617250 223 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 AC138932.5-201ENST00000617759 563 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 FAM35BP-202ENST00000497389 3337 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 AC233263.6-201ENST00000631132 1963 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.8□□□□□ -1.64
ABCA3Q99758 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 MAPK10-303ENST00000641324 3959 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ABCA3Q99758 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.79□□□□□ -1.64
ABCA3Q99758 RN7SKP74-201ENST00000362849 309 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 RNA5SP306-201ENST00000411087 107 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 AC017078.1-201ENST00000416146 368 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 UBE2V1P1-201ENST00000430836 445 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.79□□□□□ -1.64
ABCA3Q99758 RPS15AP29-201ENST00000445539 400 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 AC005008.1-201ENST00000456151 612 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 AC073522.1-201ENST00000483312 377 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.79□□□□□ -1.64
ABCA3Q99758 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.79□□□□□ -1.64
ABCA3Q99758 RNA5SP341-201ENST00000516261 117 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.79□□□□□ -1.64
ABCA3Q99758 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.79□□□□□ -1.64
ABCA3Q99758 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ABCA3Q99758 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.79□□□□□ -1.64
ABCA3Q99758 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.79□□□□□ -1.64
ABCA3Q99758 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.79□□□□□ -1.64
ABCA3Q99758 AC084036.1-201ENST00000609190 508 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 AL450472.3-201ENST00000615578 367 ntBASIC4.79□□□□□ -1.64
ABCA3Q99758 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ABCA3Q99758 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCA3Q99758 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
ABCA3Q99758 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ABCA3Q99758 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
ABCA3Q99758 SNORA38.1-201ENST00000364172 131 ntBASIC4.78□□□□□ -1.64
ABCA3Q99758 USP9YP36-201ENST00000424581 829 ntBASIC4.78□□□□□ -1.64
ABCA3Q99758 USP9YP31-201ENST00000431405 881 ntBASIC4.78□□□□□ -1.64
ABCA3Q99758 AC109925.1-201ENST00000478069 331 ntBASIC4.78□□□□□ -1.64
ABCA3Q99758 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.78□□□□□ -1.64
ABCA3Q99758 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.78□□□□□ -1.64
ABCA3Q99758 AC107294.1-201ENST00000609524 467 ntBASIC4.78□□□□□ -1.64
ABCA3Q99758 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ABCA3Q99758 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
ABCA3Q99758 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ABCA3Q99758 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.78□□□□□ -1.64
ABCA3Q99758 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ABCA3Q99758 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ABCA3Q99758 AC090337.1-201ENST00000579651 2074 ntBASIC4.78□□□□□ -1.64
ABCA3Q99758 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ABCA3Q99758 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ABCA3Q99758 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ABCA3Q99758 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ABCA3Q99758 MRPL35P4-201ENST00000453682 566 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.77□□□□□ -1.65
ABCA3Q99758 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.77□□□□□ -1.65
ABCA3Q99758 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 AL121594.4-201ENST00000556211 1196 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 NCAPGP2-201ENST00000557911 754 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.77□□□□□ -1.65
ABCA3Q99758 AC006539.2-201ENST00000601729 572 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.77□□□□□ -1.65
ABCA3Q99758 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.77□□□□□ -1.65
ABCA3Q99758 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ABCA3Q99758 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
ABCA3Q99758 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.77□□□□□ -1.65
ABCA3Q99758 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ABCA3Q99758 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.77□□□□□ -1.65
ABCA3Q99758 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ABCA3Q99758 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ABCA3Q99758 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.77□□□□□ -1.65
ABCA3Q99758 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
ABCA3Q99758 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 KCTD9P3-201ENST00000434597 1169 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 RPL21P8-201ENST00000465083 535 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 RN7SL504P-201ENST00000494496 287 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.77□□□□□ -1.65
ABCA3Q99758 UBE2NP1-201ENST00000545592 458 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 AC011611.1-201ENST00000552179 197 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.77□□□□□ -1.65
ABCA3Q99758 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ABCA3Q99758 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
ABCA3Q99758 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.76□□□□□ -1.65
ABCA3Q99758 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.76□□□□□ -1.65
ABCA3Q99758 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.76□□□□□ -1.65
ABCA3Q99758 RN7SKP111-201ENST00000410349 271 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms