Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 MED28P8-201ENST00000454831 521 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 RNU6-329P-201ENST00000459618 107 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 RN7SL308P-201ENST00000464971 297 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 OR7E83P-201ENST00000511021 970 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 RN7SKP219-201ENST00000516825 296 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 RN7SKP116-201ENST00000516902 319 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 AC022790.1-201ENST00000522872 204 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 AC005341.1-201ENST00000571086 708 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 MIR4716-201ENST00000579628 84 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 BNIP3P22-201ENST00000593399 556 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 PTCHD3P1-201ENST00000612350 537 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 AL603758.1-201ENST00000618654 241 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 AC131009.3-201ENST00000621809 287 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 AC012557.3-201ENST00000626439 255 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CITED4Q96RK1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 AL445437.1-201ENST00000623157 3087 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CITED4Q96RK1 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CITED4Q96RK1 NXPH1-205ENST00000602349 1953 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CITED4Q96RK1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CITED4Q96RK1 MARK2P10-201ENST00000454959 1437 ntBASIC5.82□□□□□ -1.48
CITED4Q96RK1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CITED4Q96RK1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC024651.2-201ENST00000562480 2098 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 SOCS5P5-201ENST00000402732 1586 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 RNU6-552P-201ENST00000362869 119 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 RNA5SP442-201ENST00000365050 107 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 RNU4-20P-201ENST00000365601 151 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 RNU6-1029P-201ENST00000384109 107 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 SNORD51-201ENST00000384320 80 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 RNU6-178P-201ENST00000384631 104 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 MIR555-201ENST00000384987 96 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 RNU6-903P-201ENST00000391270 109 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 RN7SKP159-201ENST00000410657 292 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 YWHAZP3-201ENST00000415292 738 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AL645937.1-202ENST00000421799 937 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 RPL12P46-201ENST00000436610 195 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 IGHV5-78-201ENST00000450948 295 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC007000.1-201ENST00000453064 794 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 Y_RNA.632-201ENST00000459189 102 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 snoU13.29-201ENST00000459370 104 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 RPL34P22-201ENST00000468193 318 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 RN7SL335P-201ENST00000482790 304 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC006499.3-201ENST00000506077 748 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 SNORA70.11-201ENST00000515987 138 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 SNORA70.13-201ENST00000516116 138 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 RN7SKP82-201ENST00000516786 223 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 RN7SL689P-201ENST00000577215 297 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 MIR4512-201ENST00000583257 77 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC5.81□□□□□ -1.48
CITED4Q96RK1 AC022239.4-201ENST00000602626 504 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 AL133215.3-201ENST00000609801 448 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 PART1_3.1-201ENST00000619680 131 ntBASIC5.81□□□□□ -1.48
CITED4Q96RK1 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms