Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC009963.2-201ENST00000453431 138 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC108734.3-201ENST00000481241 1165 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC011352.3-201ENST00000505162 593 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 MTCYBP16-201ENST00000509187 1129 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC087808.1-201ENST00000520501 361 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC010198.2-201ENST00000550612 259 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 SETP1-201ENST00000556014 845 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC080013.3-201ENST00000606839 578 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC048344.4-201ENST00000619744 527 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC108751.5-201ENST00000492880 1336 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC008758.3-201ENST00000507003 1829 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC009229.4-201ENST00000623854 1947 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC107027.3-201ENST00000565095 3473 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 U3.32-201ENST00000408116 212 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 SNORA11-201ENST00000408789 128 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 MTND4P22-201ENST00000413116 1169 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AL450992.3-201ENST00000413192 568 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC092393.1-201ENST00000439625 742 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 RFC5P1-201ENST00000454419 874 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 PNPLA4P1-201ENST00000458328 305 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 RPL5P24-201ENST00000463742 885 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 RPL21P71-201ENST00000465598 459 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC103987.1-201ENST00000473394 348 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC126121.1-201ENST00000482313 553 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC093534.1-201ENST00000504977 132 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC073358.1-201ENST00000505671 684 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 RNU6-885P-201ENST00000516607 104 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 PDCL2P2-201ENST00000533651 189 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AL110118.1-201ENST00000553543 400 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC087465.1-201ENST00000560574 245 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC018552.3-201ENST00000567416 561 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 RPL12P25-202ENST00000598100 674 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AL122125.1-201ENST00000616999 600 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC138965.3-201ENST00000623875 498 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AP003072.4-201ENST00000624580 310 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AC104454.1-201ENST00000421341 1401 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 Z99496.1-201ENST00000469424 1477 ntBASIC4.85□□□□□ -1.63
HMGB4Q8WW32 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms