Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC093849.1-201ENST00000563631 2209 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 MIR208A-201ENST00000362287 71 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 OR1L6-202ENST00000373684 1044 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 RNU6-317P-201ENST00000384031 107 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AL590084.2-201ENST00000401481 382 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AL445213.1-201ENST00000412589 747 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 RSU1P3-201ENST00000412878 835 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC098592.1-201ENST00000419352 333 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AL136231.1-201ENST00000429407 730 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 MTCO3P5-201ENST00000433620 714 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 UBE2V1P5-201ENST00000440070 405 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AL162591.2-201ENST00000449634 317 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 TCEA1P1-201ENST00000449716 880 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 RPL12P39-201ENST00000455456 496 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC092754.2-201ENST00000463506 460 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 RN7SL443P-201ENST00000464331 290 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC023632.4-201ENST00000517783 191 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 HIGD1AP17-201ENST00000554576 276 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC090616.2-202ENST00000584248 222 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC006539.2-201ENST00000601729 572 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AL163642.2-201ENST00000604722 1019 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AC073530.2-201ENST00000623987 261 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 AL355852.1-201ENST00000454081 1771 ntBASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SMC1BQ8NDV3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 Y_RNA.333-201ENST00000365274 102 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AL590762.2-201ENST00000395798 571 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 SETP15-201ENST00000412724 337 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 QRSL1P2-201ENST00000418582 964 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 OR10T1P-201ENST00000424327 947 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 OR2B7P-201ENST00000429302 934 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 PPIAP17-201ENST00000438507 471 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC118469.1-201ENST00000442943 488 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 MTND2P4-201ENST00000445034 1004 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 TPTE2P6-202ENST00000445572 1007 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AL035551.1-201ENST00000446931 348 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 PNPLA4P1-201ENST00000458328 305 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 RPL23AP12-201ENST00000467573 473 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 RPL7P18-201ENST00000478965 734 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 RPS17P5-201ENST00000498293 408 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 OR4C2P-201ENST00000530855 1064 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC090751.1-201ENST00000566966 267 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC011477.5-201ENST00000586571 259 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC022916.3-201ENST00000592961 742 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 VN1R84P-201ENST00000593697 235 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms