Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
DEPDC4Q8N2C3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.4□□□□□ -1.39
DEPDC4Q8N2C3 SAMMSON-203ENST00000641005 2168 ntBASIC6.4□□□□□ -1.39
DEPDC4Q8N2C3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
DEPDC4Q8N2C3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 Y_RNA.146-201ENST00000363549 102 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 Y_RNA.445-201ENST00000384168 102 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 RNU6-278P-201ENST00000390945 109 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 MTCYBP4-201ENST00000401524 249 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 RN7SKP137-201ENST00000411074 307 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 RPS3AP52-201ENST00000435639 297 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 RPL36AP6-201ENST00000435770 321 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 SUMO2P3-201ENST00000438311 288 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 RAC1P7-201ENST00000445367 377 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AL596266.1-201ENST00000448132 400 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 RPS29P15-201ENST00000458329 171 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 RNU7-180P-201ENST00000459240 63 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 OR4C1P-201ENST00000530880 937 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC128657.1-201ENST00000549459 145 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 RN7SL667P-201ENST00000582817 298 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC008737.2-201ENST00000599446 118 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC022905.1-201ENST00000503430 3048 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AC235565.1-201ENST00000456962 1325 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 TAB3P1-202ENST00000452645 1634 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 AL359263.1-201ENST00000441188 2796 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 MAPK10-357ENST00000641831 2858 ntBASIC6.39□□□□□ -1.39
DEPDC4Q8N2C3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC121333.1-201ENST00000567488 2709 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 OR5P1P-201ENST00000299512 925 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 SNORA62.1-201ENST00000364287 154 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 U3.14-201ENST00000365363 227 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 RNU4-2-201ENST00000365668 141 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AL451142.1-201ENST00000375867 775 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 RNU6-463P-201ENST00000384340 107 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 RNU2-39P-201ENST00000410604 198 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 RN7SKP144-201ENST00000411108 279 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 RPL6P29-201ENST00000414863 865 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AL451136.1-201ENST00000435399 325 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC073476.1-201ENST00000452854 407 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 RBMY2EP-202ENST00000456360 940 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 RNU7-59P-201ENST00000459101 61 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC079804.1-201ENST00000461922 436 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 RN7SL152P-201ENST00000484176 298 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 H3F3AP3-201ENST00000497682 407 ntBASIC6.38□□□□□ -1.39
DEPDC4Q8N2C3 AC020893.1-201ENST00000502452 580 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms