Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 RNU4-51P-201ENST00000364206 140 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 MIR16-1-201ENST00000385271 89 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 RNA5SP296-201ENST00000410523 111 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 RNU6-272P-201ENST00000411028 104 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 RPS3AP25-201ENST00000411660 793 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 RPS29P17-201ENST00000430795 166 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC114755.5-201ENST00000447760 831 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC092155.2-201ENST00000454675 477 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 SNORA84-201ENST00000459229 133 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 TCP11X3P-202ENST00000514289 1254 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC008494.2-201ENST00000514544 370 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 RNU6-416P-201ENST00000516265 103 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 MED28P5-201ENST00000528254 438 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 MTND1P24-201ENST00000552175 861 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC093249.4-201ENST00000564755 259 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC233702.9-201ENST00000581528 203 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 RNU4-5P-201ENST00000607255 135 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 BX005214.3-202ENST00000619809 325 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC015804.1-201ENST00000622935 435 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC015908.5-201ENST00000623289 343 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC034229.5-201ENST00000624258 185 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AP000843.1-201ENST00000624880 701 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 SALL4P2-201ENST00000423288 2910 ntBASIC5.07□□□□□ -1.6
HERC6Q8IVU3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERC6Q8IVU3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 ZFRP1-201ENST00000457579 2970 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 ZNF29P-201ENST00000225587 168 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 SNORD116-12-201ENST00000384468 92 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 RPS26P8-201ENST00000393490 348 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AL445189.1-201ENST00000405722 338 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 RPL31P52-201ENST00000407532 367 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC007738.1-201ENST00000413892 348 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 TMBIM7P-201ENST00000418074 855 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AL389915.1-201ENST00000422463 466 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AL031736.2-201ENST00000426573 787 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 USP12PY-201ENST00000427677 1064 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 MTND2P5-201ENST00000432656 1006 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC108463.1-201ENST00000450258 347 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AL009048.1-201ENST00000450437 298 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 RNA5SP103-201ENST00000459503 118 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 RN7SL517P-201ENST00000462240 305 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC020593.1-201ENST00000507399 299 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC008885.2-201ENST00000509506 930 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms