Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RN7SL604P-201ENST00000492589 296 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC010627.1-201ENST00000503819 1294 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC023158.1-201ENST00000561632 1025 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 SS18L2P2-201ENST00000583960 235 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 VN1R79P-201ENST00000593540 513 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC090953.1-201ENST00000604305 1092 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC079791.1-201ENST00000605356 973 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 uc_338.9-201ENST00000617424 182 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
CCDC50Q8IVM0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
CCDC50Q8IVM0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CCDC50Q8IVM0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC50Q8IVM0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 MIR92A2-201ENST00000385299 75 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AC127526.1-201ENST00000417526 366 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 OR5BE1P-201ENST00000425977 939 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AC073143.1-201ENST00000436316 395 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 SBDSP1-204ENST00000453858 737 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 RPL7L1P8-201ENST00000469911 741 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 CR383656.6-201ENST00000550518 394 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AC020910.2-201ENST00000603635 610 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AP004372.1-201ENST00000604842 844 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AC009032.1-201ENST00000617574 431 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 OR5BE1P-202ENST00000641168 1176 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC50Q8IVM0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 LARP1BP1-201ENST00000506036 1359 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 MIR937-201ENST00000401271 86 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 HSPE1P12-201ENST00000412576 301 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AL445528.1-201ENST00000426330 420 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 CYCSP42-201ENST00000450823 238 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 RNU6-1218P-201ENST00000458990 108 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AC092691.2-201ENST00000461787 803 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 UQCRHP4-201ENST00000471686 272 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 HMGB1P3-201ENST00000502802 616 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AC026726.1-201ENST00000512859 601 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 SNORA70.14-201ENST00000516205 110 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 RNU6-889P-201ENST00000517189 103 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 MTND1P6-201ENST00000523621 946 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AC022968.1-201ENST00000567372 442 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AC135803.1-201ENST00000608748 565 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 MIR6820-201ENST00000611508 62 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AC124312.6-202ENST00000623624 418 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms