Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 AC099522.1-202ENST00000514718 367 ntBASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 RN7SKP92-201ENST00000517266 244 ntBASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 AC007448.1-201ENST00000582714 234 ntBASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 AC244505.7-201ENST00000599675 272 ntBASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 AC139769.3-201ENST00000618383 175 ntBASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUDCD3Q8IVD9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC079741.1-201ENST00000321498 212 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 RPS16P5-201ENST00000406501 404 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 Z86062.1-201ENST00000406773 777 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC013404.1-201ENST00000413068 249 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC069213.2-201ENST00000420238 366 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 MTCO1P52-201ENST00000433928 531 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 RPS3AP54-201ENST00000435535 734 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 MTND2P21-201ENST00000436242 1042 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 RPS4XP4-201ENST00000443195 763 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AL513533.1-201ENST00000453728 415 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 MTCO3P20-201ENST00000454926 688 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 DNAJC19P1-201ENST00000455312 319 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 RPL23AP12-201ENST00000467573 473 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 RN7SL481P-201ENST00000477764 299 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AL161729.3-201ENST00000603533 673 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC242628.1-201ENST00000606810 391 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AP003072.4-201ENST00000624580 310 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 AC244205.2-202ENST00000635781 342 ntBASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUDCD3Q8IVD9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AL137100.1-201ENST00000556703 1620 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 RNU1-132P-201ENST00000364300 164 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 RNU6-185P-201ENST00000384421 107 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 RPS3AP23-201ENST00000401762 784 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 HMGB3P19-201ENST00000403971 560 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 RNU4-25P-201ENST00000410569 230 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 RPS20P25-201ENST00000412447 352 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 RPL7AP73-201ENST00000413490 353 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 TRGV6-201ENST00000417928 299 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 COX6B1P7-201ENST00000430845 235 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 SNRPGP5-201ENST00000456003 220 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 RPL23AP24-201ENST00000458203 385 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 IGBP1P5-201ENST00000507524 1000 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC091515.1-201ENST00000548110 679 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AL049870.4-201ENST00000555741 486 ntBASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.93□□□□□ -1.78
NUDCD3Q8IVD9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms