Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU2-8P-201ENST00000410727 190 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 PGBD4P3-201ENST00000440731 581 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 MTND6P13-201ENST00000443510 523 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 CYCSP51-201ENST00000443545 318 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 MTND3P10-201ENST00000450967 341 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 SDC4P-201ENST00000453285 601 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AL133445.1-201ENST00000467051 452 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC079382.1-201ENST00000493346 557 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 RNU6-941P-201ENST00000516346 108 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 RNA5SP34-201ENST00000516887 130 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 RNU6-1003P-201ENST00000517099 105 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AP005639.2-201ENST00000527592 928 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AL121594.2-201ENST00000541658 472 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC124068.1-201ENST00000563131 678 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 OR4H6P-201ENST00000563771 921 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 TXNP4-201ENST00000575018 310 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC005730.3-201ENST00000583067 366 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 MIR4260-201ENST00000583107 67 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC011477.5-201ENST00000586571 259 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 COX6CP4-201ENST00000605798 228 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC104260.1-201ENST00000616660 539 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC006338.1-201ENST00000618453 749 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 DUXAP9-208ENST00000622815 614 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AC110994.2-201ENST00000635481 492 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AL451142.2-201ENST00000429076 2090 ntBASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.37□□□□□ -1.39
NPAS4Q8IUM7 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 RNU6-1243P-201ENST00000364028 107 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 RPS3AP38-201ENST00000435889 763 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 BTF3P5-201ENST00000457252 467 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 RN7SL72P-201ENST00000460697 269 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AC092989.1-201ENST00000481235 277 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 MTCO2P30-201ENST00000503662 364 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 OR5M14P-201ENST00000506803 618 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 BX510359.5-201ENST00000515651 304 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 IGLV3-30-201ENST00000524362 298 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AC124947.2-202ENST00000552735 133 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AC063949.1-201ENST00000552900 865 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AC000123.2-201ENST00000623124 461 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms