Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 NDUFA5P5-201ENST00000468361 342 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RPL7P9-201ENST00000468715 747 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 MTND3P7-201ENST00000474435 343 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 USP9YP5-201ENST00000511770 630 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 OR5BM1P-201ENST00000512021 366 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC026412.2-201ENST00000512270 1075 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC007954.1-201ENST00000554198 494 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC068446.3-201ENST00000555285 382 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC110760.3-201ENST00000598794 467 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC105129.3-201ENST00000605455 485 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 SNORD91B-202ENST00000608459 222 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC078899.5-201ENST00000612475 178 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AF246928.1-201ENST00000623768 87 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 AC004777.1-201ENST00000624317 287 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 MTCO1P14-201ENST00000441695 1559 ntBASIC4.99□□□□□ -1.61
RNF220Q5VTB9 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF220Q5VTB9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 MAPK10-304ENST00000641341 3984 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 LINC00561-201ENST00000565815 2738 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 RNU1-94P-201ENST00000362627 173 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 BMS1P3-201ENST00000372011 932 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 SNORD116-1-201ENST00000384335 95 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 CYCSP45-201ENST00000402289 315 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 BTBD10P2-201ENST00000404779 676 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 EIF4A1P3-201ENST00000411521 244 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 TMBIM7P-201ENST00000418074 855 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC004690.1-201ENST00000418216 328 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 RPS15AP40-201ENST00000419621 391 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC073335.1-201ENST00000427776 363 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AL590103.1-201ENST00000434488 307 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 MTCYBP39-201ENST00000437562 491 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC019185.1-201ENST00000442718 389 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 TRGVB-201ENST00000453257 471 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC007998.1-201ENST00000474156 672 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC105031.1-201ENST00000518550 476 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC022360.1-201ENST00000521058 340 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC008127.2-201ENST00000549925 1075 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 RN7SL802P-201ENST00000577858 299 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC113194.1-201ENST00000606037 500 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 uc_338.18-201ENST00000615451 175 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AL031667.3-201ENST00000620124 655 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 OR52B5P-202ENST00000641118 1110 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms