Protein–RNA interactions for Protein: Q15431

SYCP1, Synaptonemal complex protein 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1Q15431 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYCP1Q15431 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYCP1Q15431 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYCP1Q15431 RNU4-39P-201ENST00000362455 127 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 RNA5SP509-201ENST00000364577 119 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 U3.22-201ENST00000391120 215 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 MTCYBP7-201ENST00000419540 1134 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 CHIAP3-201ENST00000423668 1133 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 AC009965.2-201ENST00000425328 970 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 BTF3P10-201ENST00000433415 495 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.41□□□□□ -1.7
SYCP1Q15431 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.41□□□□□ -1.7
SYCP1Q15431 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SYCP1Q15431 HMGB3P8-201ENST00000449709 577 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 AC004801.2-202ENST00000463559 283 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 SEPT7P6-201ENST00000469999 1143 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.41□□□□□ -1.7
SYCP1Q15431 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.41□□□□□ -1.7
SYCP1Q15431 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.41□□□□□ -1.7
SYCP1Q15431 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.41□□□□□ -1.7
SYCP1Q15431 AC026726.1-201ENST00000512859 601 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.41□□□□□ -1.7
SYCP1Q15431 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.41□□□□□ -1.7
SYCP1Q15431 AL121576.1-201ENST00000556055 276 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.41□□□□□ -1.7
SYCP1Q15431 MIR4284-201ENST00000578924 81 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.41□□□□□ -1.7
SYCP1Q15431 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.41□□□□□ -1.7
SYCP1Q15431 AL049634.3-201ENST00000604968 457 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 RMST_8.1-201ENST00000610287 165 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 RNVU1-4-201ENST00000612985 164 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 AC016957.2-201ENST00000616998 848 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.41□□□□□ -1.7
SYCP1Q15431 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.41□□□□□ -1.7
SYCP1Q15431 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.41□□□□□ -1.7
SYCP1Q15431 EXOC5P1-201ENST00000510543 1969 ntBASIC4.41□□□□□ -1.7
SYCP1Q15431 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYCP1Q15431 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SYCP1Q15431 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYCP1Q15431 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SYCP1Q15431 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.4□□□□□ -1.7
SYCP1Q15431 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.7
SYCP1Q15431 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 SMC4P1-201ENST00000414479 527 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCP1Q15431 RPL30P3-201ENST00000424262 333 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.4□□□□□ -1.71
SYCP1Q15431 RPL7P48-201ENST00000461513 746 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 RPL7P1-201ENST00000468161 747 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 RPL23AP14-201ENST00000468281 468 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 RPL7P9-201ENST00000468715 747 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.4□□□□□ -1.71
SYCP1Q15431 IGBP1P5-201ENST00000507524 1000 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.4□□□□□ -1.71
SYCP1Q15431 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.4□□□□□ -1.71
SYCP1Q15431 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
SYCP1Q15431 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCP1Q15431 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.4□□□□□ -1.71
SYCP1Q15431 AC025627.2-201ENST00000576220 160 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 AL020997.2-201ENST00000602607 184 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 AC008121.2-201ENST00000614647 523 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 AC123768.4-201ENST00000616244 701 ntBASIC4.4□□□□□ -1.71
SYCP1Q15431 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.4□□□□□ -1.71
SYCP1Q15431 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCP1Q15431 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCP1Q15431 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYCP1Q15431 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCP1Q15431 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYCP1Q15431 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SYCP1Q15431 ASNSP1-204ENST00000641977 1664 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.39□□□□□ -1.71
SYCP1Q15431 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.39□□□□□ -1.71
SYCP1Q15431 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.39□□□□□ -1.71
SYCP1Q15431 AC106871.1-201ENST00000568324 3102 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 MIR383-201ENST00000362257 73 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 SNORA60-201ENST00000362396 134 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 RNA5SP366-201ENST00000365454 123 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
SYCP1Q15431 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 MIR1251-201ENST00000408552 70 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.39□□□□□ -1.71
SYCP1Q15431 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.39□□□□□ -1.71
SYCP1Q15431 AC092832.1-201ENST00000422934 400 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms