Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX4Q06945 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX4Q06945 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX4Q06945 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX4Q06945 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX4Q06945 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX4Q06945 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX4Q06945 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX4Q06945 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 GAPDHP24-201ENST00000328713 983 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 RNA5SP132-201ENST00000364725 118 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 SNORA51.12-201ENST00000384448 134 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SOX4Q06945 VN1R36P-201ENST00000414936 291 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX4Q06945 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX4Q06945 RPL23AP20-201ENST00000447965 421 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 OR7E116P-201ENST00000448529 957 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX4Q06945 RPL7P48-201ENST00000461513 746 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 AC021660.1-201ENST00000465006 554 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 DUTP1-201ENST00000493631 470 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 KLRA1P-201ENST00000503499 986 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX4Q06945 MTND6P2-201ENST00000512226 524 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 ATP5LP3-201ENST00000514223 304 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 RNU2-46P-201ENST00000517038 113 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX4Q06945 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX4Q06945 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.15□□□□□ -1.42
SOX4Q06945 AL121594.2-201ENST00000541658 472 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX4Q06945 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX4Q06945 AL049872.1-201ENST00000556323 322 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX4Q06945 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX4Q06945 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX4Q06945 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX4Q06945 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SOX4Q06945 AC009268.2-201ENST00000621925 457 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 AL691477.1-201ENST00000624398 162 ntBASIC6.15□□□□□ -1.42
SOX4Q06945 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX4Q06945 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX4Q06945 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX4Q06945 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX4Q06945 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SOX4Q06945 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX4Q06945 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SOX4Q06945 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.15□□□□□ -1.43
SOX4Q06945 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX4Q06945 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX4Q06945 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX4Q06945 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX4Q06945 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX4Q06945 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX4Q06945 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX4Q06945 Y_RNA.138-201ENST00000363462 102 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 Y_RNA.431-201ENST00000384086 102 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX4Q06945 AL391361.1-201ENST00000405580 489 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 VN1R8P-201ENST00000407739 893 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 AL450338.1-201ENST00000407987 512 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 RNA5SP118-201ENST00000410385 109 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX4Q06945 MTND4LP17-201ENST00000414607 293 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 SPA17P1-201ENST00000416656 452 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX4Q06945 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX4Q06945 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX4Q06945 AC113412.1-201ENST00000425840 504 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 USP24P1-201ENST00000433802 779 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 HMGB3P12-201ENST00000438745 556 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX4Q06945 AL935212.3-201ENST00000450729 284 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX4Q06945 AC099563.1-201ENST00000456086 418 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 IGBP1P4-201ENST00000503202 879 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 POU5F1P7-201ENST00000508759 541 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX4Q06945 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX4Q06945 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX4Q06945 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX4Q06945 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX4Q06945 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX4Q06945 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX4Q06945 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX4Q06945 AC245014.2-201ENST00000603689 287 ntBASIC6.14□□□□□ -1.43
SOX4Q06945 AC246785.4-201ENST00000605374 287 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms