Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL1Q00532 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDKL1Q00532 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL1Q00532 AC006042.3-201ENST00000454684 1469 ntBASIC4.11□□□□□ -1.75
CDKL1Q00532 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL1Q00532 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL1Q00532 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL1Q00532 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDKL1Q00532 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL1Q00532 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.1□□□□□ -1.75
CDKL1Q00532 MTATP6P31-201ENST00000406985 692 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 RNA5SP36-201ENST00000410197 133 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL1Q00532 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL1Q00532 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL1Q00532 RPL23AP46-201ENST00000438548 490 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 CBX1P1-201ENST00000440184 427 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL1Q00532 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL1Q00532 EIF4A1P11-201ENST00000451239 222 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL1Q00532 KCTD9P2-201ENST00000512203 1013 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 CDH12P4-201ENST00000517835 295 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 CDH12P3-201ENST00000517935 295 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 CDH12P1-201ENST00000518435 295 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL1Q00532 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.1□□□□□ -1.75
CDKL1Q00532 MTND4LP25-201ENST00000570218 163 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 MIR4330-201ENST00000579077 105 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 AC020914.4-201ENST00000597690 277 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 AC104785.1-201ENST00000603220 588 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 AC245100.7-201ENST00000609678 442 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL1Q00532 AL590396.2-201ENST00000636511 1041 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 AC010300.1-201ENST00000600671 5134 ntBASIC4.1□□□□□ -1.75
CDKL1Q00532 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL1Q00532 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDKL1Q00532 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL1Q00532 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CDKL1Q00532 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CDKL1Q00532 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDKL1Q00532 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL1Q00532 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CDKL1Q00532 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL1Q00532 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL1Q00532 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL1Q00532 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL1Q00532 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL1Q00532 AC139713.2-214ENST00000642059 1811 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL1Q00532 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL1Q00532 FAM3C2-201ENST00000312214 681 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDKL1Q00532 RNU6-543P-201ENST00000362576 108 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 RNA5SP322-201ENST00000363617 119 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 RNA5SP27-201ENST00000363839 119 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 RNA5SP509-201ENST00000364577 119 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 OR6K3-202ENST00000368146 996 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 MIR937-201ENST00000401271 86 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 NRBF2P2-201ENST00000413087 861 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 AL732292.1-201ENST00000426692 226 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 AC068287.1-201ENST00000430283 295 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 MTCO1P43-201ENST00000431831 488 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL1Q00532 ACTR3P2-201ENST00000439585 1257 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL1Q00532 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL1Q00532 AC239809.1-201ENST00000450470 217 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 RPL36AP13-201ENST00000457490 317 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 RNA5SP246-201ENST00000458909 119 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 APOOP2-201ENST00000461561 539 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 RN7SL738P-201ENST00000470264 297 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.09□□□□□ -1.75
CDKL1Q00532 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL1Q00532 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AC112518.2-201ENST00000508565 425 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL1Q00532 RNA5SP519-201ENST00000516480 119 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AP000916.1-201ENST00000533869 835 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL1Q00532 AL355816.1-201ENST00000607951 118 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 AC009704.2-201ENST00000618739 483 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 AC073429.2-201ENST00000569694 1444 ntBASIC4.09□□□□□ -1.75
CDKL1Q00532 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
CDKL1Q00532 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CDKL1Q00532 AC107027.3-201ENST00000565095 3473 ntBASIC4.08□□□□□ -1.76
CDKL1Q00532 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDKL1Q00532 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL1Q00532 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL1Q00532 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL1Q00532 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL1Q00532 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms