Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC087763.1-201ENST00000603391 286 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AL008729.2-201ENST00000606393 473 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AL353600.1-201ENST00000608148 251 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC016769.4-201ENST00000616893 535 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AL512506.2-201ENST00000624472 458 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CX3CL1P78423 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CX3CL1P78423 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
CX3CL1P78423 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.93□□□□□ -1.78
CX3CL1P78423 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.93□□□□□ -1.78
CX3CL1P78423 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.93□□□□□ -1.78
CX3CL1P78423 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.93□□□□□ -1.78
CX3CL1P78423 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.93□□□□□ -1.78
CX3CL1P78423 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CX3CL1P78423 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CX3CL1P78423 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 RNU5D-1-201ENST00000363299 116 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 FABP12P1-201ENST00000401911 322 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AP000580.1-201ENST00000404439 358 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 SPTLC1P2-201ENST00000407089 121 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 RPL23AP47-201ENST00000408017 460 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 EIF4A1P3-201ENST00000411521 244 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 DPPA2P3-201ENST00000411853 655 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 LUZP4P1-201ENST00000415420 344 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AC092634.6-201ENST00000418558 192 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CL1P78423 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 AC073143.1-201ENST00000436316 395 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 TMX2P1-201ENST00000436507 708 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AL034418.1-201ENST00000448675 860 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CL1P78423 snoU13.7-201ENST00000459220 104 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 RPS17P2-201ENST00000461663 408 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 RPL5P24-201ENST00000463742 885 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AC108751.2-201ENST00000469993 231 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.93□□□□□ -1.78
CX3CL1P78423 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.93□□□□□ -1.78
CX3CL1P78423 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 ENPP7P9-201ENST00000514456 627 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 FABP5P12-201ENST00000515543 389 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 RNU6-1225P-201ENST00000516336 65 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.93□□□□□ -1.78
CX3CL1P78423 BNIP3P26-201ENST00000600827 554 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AC233280.2-201ENST00000603917 1070 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AC104687.2-201ENST00000604442 342 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AC087783.2-201ENST00000605070 562 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AC019206.1-201ENST00000621938 425 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.93□□□□□ -1.78
CX3CL1P78423 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.93□□□□□ -1.78
CX3CL1P78423 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CX3CL1P78423 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CX3CL1P78423 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.93□□□□□ -1.78
CX3CL1P78423 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AC107068.1-201ENST00000563286 4218 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 MTND5P31-201ENST00000419366 1374 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AC025125.1-201ENST00000624743 1922 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 Y_RNA.408-201ENST00000383987 102 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AL121978.1-201ENST00000402778 359 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 RNU2-21P-201ENST00000410368 188 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms