Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH12P55289 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 RNA5SP345-201ENST00000410646 108 ntBASIC4.44□□□□□ -1.7
CDH12P55289 GJA6P-201ENST00000415117 1042 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC004074.1-201ENST00000421810 1063 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AL390023.1-201ENST00000428836 262 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH12P55289 YWHAZP7-201ENST00000436906 631 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH12P55289 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.44□□□□□ -1.7
CDH12P55289 PPIAP20-201ENST00000449839 135 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH12P55289 VPS26AP1-201ENST00000483197 979 ntBASIC4.44□□□□□ -1.7
CDH12P55289 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH12P55289 MTCYBP16-201ENST00000509187 1129 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC109471.1-201ENST00000511631 612 ntBASIC4.44□□□□□ -1.7
CDH12P55289 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDH12P55289 AC004980.4-201ENST00000513375 203 ntBASIC4.44□□□□□ -1.7
CDH12P55289 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH12P55289 RNA5SP92-201ENST00000516437 110 ntBASIC4.44□□□□□ -1.7
CDH12P55289 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH12P55289 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH12P55289 AC087808.1-201ENST00000520501 361 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC008562.1-201ENST00000521763 330 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH12P55289 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH12P55289 AC005832.3-201ENST00000537929 631 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH12P55289 AC090022.1-201ENST00000546569 311 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH12P55289 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH12P55289 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH12P55289 AC006116.3-201ENST00000592968 361 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.44□□□□□ -1.7
CDH12P55289 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH12P55289 AC106791.2-201ENST00000604680 391 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC096553.1-201ENST00000605169 829 ntBASIC4.44□□□□□ -1.7
CDH12P55289 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 AC090246.1-201ENST00000616499 426 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC121761.2-201ENST00000617300 689 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AC005086.4-201ENST00000623065 213 ntBASIC4.44□□□□□ -1.7
CDH12P55289 AL353662.3-201ENST00000625131 237 ntBASIC4.44□□□□□ -1.7
CDH12P55289 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDH12P55289 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CDH12P55289 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 ZNF542P-204ENST00000482727 1305 ntBASIC4.44□□□□□ -1.7
CDH12P55289 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH12P55289 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH12P55289 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDH12P55289 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 OR56B2P-201ENST00000317102 954 ntBASIC4.43□□□□□ -1.7
CDH12P55289 RNU6-839P-201ENST00000363347 108 ntBASIC4.43□□□□□ -1.7
CDH12P55289 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH12P55289 RNU1-106P-201ENST00000384382 164 ntBASIC4.43□□□□□ -1.7
CDH12P55289 RN7SKP273-201ENST00000411392 314 ntBASIC4.43□□□□□ -1.7
CDH12P55289 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.43□□□□□ -1.7
CDH12P55289 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 MTND4P20-201ENST00000424125 869 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CDH12P55289 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.43□□□□□ -1.7
CDH12P55289 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH12P55289 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH12P55289 AC016724.1-201ENST00000453215 421 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AL109741.2-201ENST00000455561 343 ntBASIC4.43□□□□□ -1.7
CDH12P55289 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 RPL5P24-201ENST00000463742 885 ntBASIC4.43□□□□□ -1.7
CDH12P55289 RPS26P39-201ENST00000469206 341 ntBASIC4.43□□□□□ -1.7
CDH12P55289 RPS3AP43-201ENST00000479743 781 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 RPF2P2-201ENST00000504693 896 ntBASIC4.43□□□□□ -1.7
CDH12P55289 WBP1LP4-201ENST00000505043 344 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AC079395.1-201ENST00000510981 262 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AC010285.3-201ENST00000511668 676 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AC008494.2-201ENST00000514544 370 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH12P55289 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH12P55289 FKBP1BP1-201ENST00000553366 325 ntBASIC4.43□□□□□ -1.7
CDH12P55289 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 AC068714.1-201ENST00000559623 800 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH12P55289 AC002400.1-201ENST00000569310 726 ntBASIC4.43□□□□□ -1.7
CDH12P55289 MIR3691-201ENST00000578066 90 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms