Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.72□□□□□ -1.65
NR1H2P55055 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.72□□□□□ -1.65
NR1H2P55055 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.72□□□□□ -1.65
NR1H2P55055 AL445423.1-201ENST00000609941 536 ntBASIC4.72□□□□□ -1.65
NR1H2P55055 AC105429.2-201ENST00000610567 517 ntBASIC4.72□□□□□ -1.65
NR1H2P55055 AC090897.3-201ENST00000636973 1157 ntBASIC4.72□□□□□ -1.65
NR1H2P55055 ELL2P4-201ENST00000446870 1376 ntBASIC4.72□□□□□ -1.65
NR1H2P55055 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NR1H2P55055 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NR1H2P55055 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NR1H2P55055 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NR1H2P55055 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.72□□□□□ -1.65
NR1H2P55055 AC074029.4-201ENST00000624796 1859 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR1H2P55055 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR1H2P55055 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR1H2P55055 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NR1H2P55055 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NR1H2P55055 RNU6-1243P-201ENST00000364028 107 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 RNU1-149P-201ENST00000390870 161 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AL589647.1-201ENST00000402485 466 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 ZNF603P-201ENST00000405613 487 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.71□□□□□ -1.66
NR1H2P55055 EIF4EP1-201ENST00000422311 642 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 SRSF1P1-201ENST00000424058 520 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 EIF4HP2-201ENST00000424380 563 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AL161722.2-201ENST00000434731 981 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.71□□□□□ -1.66
NR1H2P55055 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.71□□□□□ -1.66
NR1H2P55055 CR769776.1-201ENST00000441254 787 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC005726.1-201ENST00000494679 427 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 RNF138P1-201ENST00000502765 546 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 SNRPCP2-201ENST00000504370 475 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 PRELID3BP5-201ENST00000508612 460 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC112673.1-201ENST00000513168 575 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC018797.3-201ENST00000513388 1241 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC092593.2-201ENST00000513866 913 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC104057.1-201ENST00000515547 497 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 RNU6-885P-201ENST00000516607 104 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.71□□□□□ -1.66
NR1H2P55055 HMGB3P26-201ENST00000560051 582 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.71□□□□□ -1.66
NR1H2P55055 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NR1H2P55055 ATP5J2P6-201ENST00000565203 266 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 OR1F2P-201ENST00000570470 933 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.71□□□□□ -1.66
NR1H2P55055 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.71□□□□□ -1.66
NR1H2P55055 CCDC58P3-201ENST00000590792 430 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 HMGB2P1-201ENST00000591146 634 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC010680.4-201ENST00000605334 543 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC133644.2-201ENST00000608142 540 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC024257.5-201ENST00000612739 531 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC068722.2-201ENST00000618734 544 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AC005086.4-201ENST00000623065 213 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AC055839.1-201ENST00000634467 498 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NR1H2P55055 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NR1H2P55055 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NR1H2P55055 AC011493.1-201ENST00000596753 1632 ntBASIC4.71□□□□□ -1.66
NR1H2P55055 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.71□□□□□ -1.66
NR1H2P55055 AP005901.5-201ENST00000545779 1796 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AL359922.3-201ENST00000624779 1670 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.7□□□□□ -1.66
NR1H2P55055 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NR1H2P55055 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NR1H2P55055 RNU6-492P-201ENST00000363035 104 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 RNU1-83P-201ENST00000363426 164 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 snoZ40.1-201ENST00000364540 72 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NR1H2P55055 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NR1H2P55055 RNU6-441P-201ENST00000384545 106 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AF228730.1-201ENST00000397972 663 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 SSXP10-201ENST00000402595 565 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AL133388.1-201ENST00000404509 287 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC004987.3-201ENST00000413879 771 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AL139128.1-201ENST00000413921 941 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC092447.3-201ENST00000426027 686 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 COX6CP15-201ENST00000426313 211 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC005033.1-201ENST00000428904 813 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 SEPT7P5-201ENST00000434048 306 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms