Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDX1P52945 RNA5SP315-201ENST00000516340 116 ntBASIC4.33□□□□□ -1.72
PDX1P52945 SNORA31.9-201ENST00000516429 84 ntBASIC4.33□□□□□ -1.72
PDX1P52945 RNA5SP312-201ENST00000517068 116 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AP003730.1-201ENST00000524605 285 ntBASIC4.33□□□□□ -1.72
PDX1P52945 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 TRAV8-5-201ENST00000537369 341 ntBASIC4.33□□□□□ -1.72
PDX1P52945 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.33□□□□□ -1.72
PDX1P52945 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.33□□□□□ -1.72
PDX1P52945 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.33□□□□□ -1.72
PDX1P52945 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 IPO5P1-202ENST00000600039 287 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AC091979.2-201ENST00000607514 214 ntBASIC4.33□□□□□ -1.72
PDX1P52945 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 AC013468.1-201ENST00000608680 598 ntBASIC4.33□□□□□ -1.72
PDX1P52945 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.33□□□□□ -1.72
PDX1P52945 AL121890.2-201ENST00000617644 465 ntBASIC4.33□□□□□ -1.72
PDX1P52945 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.33□□□□□ -1.72
PDX1P52945 MIR3653-201ENST00000625572 110 ntBASIC4.33□□□□□ -1.72
PDX1P52945 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.33□□□□□ -1.72
PDX1P52945 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDX1P52945 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.33□□□□□ -1.72
PDX1P52945 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PDX1P52945 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PDX1P52945 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AL355852.1-201ENST00000454081 1771 ntBASIC4.32□□□□□ -1.72
PDX1P52945 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.32□□□□□ -1.72
PDX1P52945 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PDX1P52945 AC100871.1-201ENST00000507871 1456 ntBASIC4.32□□□□□ -1.72
PDX1P52945 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.32□□□□□ -1.72
PDX1P52945 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PDX1P52945 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 AC008033.1-201ENST00000216407 1162 ntBASIC4.32□□□□□ -1.72
PDX1P52945 OR5P1P-201ENST00000299512 925 ntBASIC4.32□□□□□ -1.72
PDX1P52945 RNU6-304P-201ENST00000364855 107 ntBASIC4.32□□□□□ -1.72
PDX1P52945 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PDX1P52945 RNU1-13P-201ENST00000384499 162 ntBASIC4.32□□□□□ -1.72
PDX1P52945 MIR92A2-201ENST00000385299 75 ntBASIC4.32□□□□□ -1.72
PDX1P52945 TAF13P2-201ENST00000416876 286 ntBASIC4.32□□□□□ -1.72
PDX1P52945 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.32□□□□□ -1.72
PDX1P52945 AC106883.1-201ENST00000418805 562 ntBASIC4.32□□□□□ -1.72
PDX1P52945 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.32□□□□□ -1.72
PDX1P52945 MTCYBP32-201ENST00000427945 1084 ntBASIC4.32□□□□□ -1.72
PDX1P52945 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.32□□□□□ -1.72
PDX1P52945 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.32□□□□□ -1.72
PDX1P52945 MTCO1P53-201ENST00000441633 699 ntBASIC4.32□□□□□ -1.72
PDX1P52945 RPL23AP43-201ENST00000446445 471 ntBASIC4.32□□□□□ -1.72
PDX1P52945 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 AL050341.1-201ENST00000447743 313 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AC114755.5-201ENST00000447760 831 ntBASIC4.32□□□□□ -1.72
PDX1P52945 EXOSC3P1-201ENST00000448649 500 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AL935212.3-201ENST00000450729 284 ntBASIC4.32□□□□□ -1.72
PDX1P52945 RNU6-1218P-201ENST00000458990 108 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AC053481.1-201ENST00000467217 306 ntBASIC4.32□□□□□ -1.72
PDX1P52945 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.32□□□□□ -1.72
PDX1P52945 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.32□□□□□ -1.72
PDX1P52945 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
PDX1P52945 AC093752.1-206ENST00000511823 336 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.32□□□□□ -1.72
PDX1P52945 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.32□□□□□ -1.72
PDX1P52945 OR8I1P-201ENST00000529291 931 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AC006518.2-201ENST00000542513 940 ntBASIC4.32□□□□□ -1.72
PDX1P52945 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AC095057.3-201ENST00000567102 1157 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.32□□□□□ -1.72
PDX1P52945 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.32□□□□□ -1.72
PDX1P52945 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
PDX1P52945 AL591034.3-201ENST00000605511 685 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AL392048.1-201ENST00000613946 534 ntBASIC4.32□□□□□ -1.72
PDX1P52945 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.32□□□□□ -1.72
PDX1P52945 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.32□□□□□ -1.72
PDX1P52945 AC139769.3-201ENST00000618383 175 ntBASIC4.32□□□□□ -1.72
PDX1P52945 RNA5SP196-201ENST00000625967 102 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AL121594.5-201ENST00000631724 573 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AL590396.4-201ENST00000636779 956 ntBASIC4.32□□□□□ -1.72
PDX1P52945 OR2L1P-202ENST00000641567 1023 ntBASIC4.32□□□□□ -1.72
PDX1P52945 AC092079.1-201ENST00000558620 1985 ntBASIC4.32□□□□□ -1.72
PDX1P52945 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 CPHL1P-201ENST00000461341 3407 ntBASIC4.32□□□□□ -1.72
PDX1P52945 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.32□□□□□ -1.72
PDX1P52945 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDX1P52945 CASC19-204ENST00000641001 2055 ntBASIC4.31□□□□□ -1.72
PDX1P52945 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDX1P52945 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDX1P52945 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
PDX1P52945 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDX1P52945 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.31□□□□□ -1.72
PDX1P52945 AC104446.1-201ENST00000613728 1321 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms