Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CENPAP49450 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CENPAP49450 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.52□□□□□ -1.69
CENPAP49450 A2MP1-204ENST00000566278 4130 ntBASIC4.52□□□□□ -1.69
CENPAP49450 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CENPAP49450 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CENPAP49450 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.52□□□□□ -1.69
CENPAP49450 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CENPAP49450 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.52□□□□□ -1.69
CENPAP49450 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.52□□□□□ -1.69
CENPAP49450 AC011266.1-201ENST00000624119 3569 ntBASIC4.52□□□□□ -1.69
CENPAP49450 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 DHX9P1-201ENST00000436565 3076 ntBASIC4.51□□□□□ -1.69
CENPAP49450 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CENPAP49450 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
CENPAP49450 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CENPAP49450 SNORA70.10-201ENST00000384515 134 ntBASIC4.51□□□□□ -1.69
CENPAP49450 TAF9BP1-201ENST00000396646 746 ntBASIC4.51□□□□□ -1.69
CENPAP49450 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.51□□□□□ -1.69
CENPAP49450 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CENPAP49450 RNU2-65P-201ENST00000410162 185 ntBASIC4.51□□□□□ -1.69
CENPAP49450 NRBF2P2-201ENST00000413087 861 ntBASIC4.51□□□□□ -1.69
CENPAP49450 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 RPL7P53-201ENST00000421245 739 ntBASIC4.51□□□□□ -1.69
CENPAP49450 MRPS36P1-201ENST00000421291 307 ntBASIC4.51□□□□□ -1.69
CENPAP49450 EI24P4-201ENST00000423683 1078 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC108075.1-201ENST00000424692 529 ntBASIC4.51□□□□□ -1.69
CENPAP49450 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.51□□□□□ -1.69
CENPAP49450 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.51□□□□□ -1.69
CENPAP49450 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.51□□□□□ -1.69
CENPAP49450 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 ACTR3P2-201ENST00000439585 1257 ntBASIC4.51□□□□□ -1.69
CENPAP49450 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 RPL7AP61-201ENST00000443410 636 ntBASIC4.51□□□□□ -1.69
CENPAP49450 MTND2P22-201ENST00000444325 1033 ntBASIC4.51□□□□□ -1.69
CENPAP49450 RPL7P59-201ENST00000447700 943 ntBASIC4.51□□□□□ -1.69
CENPAP49450 ANKRD26P4-201ENST00000455755 950 ntBASIC4.51□□□□□ -1.69
CENPAP49450 ATG12P2-201ENST00000456830 416 ntBASIC4.51□□□□□ -1.69
CENPAP49450 CYCSP34-201ENST00000458172 304 ntBASIC4.51□□□□□ -1.69
CENPAP49450 RN7SL517P-201ENST00000462240 305 ntBASIC4.51□□□□□ -1.69
CENPAP49450 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 AC073358.1-201ENST00000505671 684 ntBASIC4.51□□□□□ -1.69
CENPAP49450 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 AC116353.3-201ENST00000511215 249 ntBASIC4.51□□□□□ -1.69
CENPAP49450 RPL7L1P13-201ENST00000511702 739 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC008494.2-201ENST00000514544 370 ntBASIC4.51□□□□□ -1.69
CENPAP49450 RNA5SP249-201ENST00000516127 99 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC027308.1-201ENST00000517993 110 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AP003461.1-201ENST00000528866 78 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 AC007834.2-201ENST00000536310 343 ntBASIC4.51□□□□□ -1.69
CENPAP49450 OSBPL9P5-201ENST00000542581 171 ntBASIC4.51□□□□□ -1.69
CENPAP49450 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 AC004217.3-201ENST00000551552 878 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.51□□□□□ -1.69
CENPAP49450 AGGF1P6-201ENST00000569213 976 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.51□□□□□ -1.69
CENPAP49450 BNIP3P26-201ENST00000600827 554 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC123768.4-201ENST00000616244 701 ntBASIC4.51□□□□□ -1.69
CENPAP49450 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.51□□□□□ -1.69
CENPAP49450 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CENPAP49450 AC131159.1-201ENST00000621854 213 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC015804.1-201ENST00000622935 435 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AC007490.1-201ENST00000624321 703 ntBASIC4.51□□□□□ -1.69
CENPAP49450 AP000843.1-201ENST00000624880 701 ntBASIC4.51□□□□□ -1.69
CENPAP49450 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.51□□□□□ -1.69
CENPAP49450 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CENPAP49450 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.51□□□□□ -1.69
CENPAP49450 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CENPAP49450 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CENPAP49450 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.51□□□□□ -1.69
CENPAP49450 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CENPAP49450 AC095050.2-201ENST00000510748 1458 ntBASIC4.5□□□□□ -1.69
CENPAP49450 SALL4P2-201ENST00000423288 2910 ntBASIC4.5□□□□□ -1.69
CENPAP49450 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CENPAP49450 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 AL512646.1-201ENST00000269395 1077 ntBASIC4.5□□□□□ -1.69
CENPAP49450 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CENPAP49450 SNORA73.1-201ENST00000363107 205 ntBASIC4.5□□□□□ -1.69
CENPAP49450 Y_RNA.169-201ENST00000363745 96 ntBASIC4.5□□□□□ -1.69
CENPAP49450 RNU6-619P-201ENST00000365146 108 ntBASIC4.5□□□□□ -1.69
CENPAP49450 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
CENPAP49450 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 MIR3074-201ENST00000384885 81 ntBASIC4.5□□□□□ -1.69
CENPAP49450 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.5□□□□□ -1.69
CENPAP49450 NPM1P4-201ENST00000414095 812 ntBASIC4.5□□□□□ -1.69
CENPAP49450 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.5□□□□□ -1.69
CENPAP49450 TMBIM7P-201ENST00000418074 855 ntBASIC4.5□□□□□ -1.69
CENPAP49450 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms