Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIR124-3-201ENST00000384866 87 ntBASIC3.99□□□□□ -1.77
RORAP35398 SNORD66.1-201ENST00000391230 76 ntBASIC3.99□□□□□ -1.77
RORAP35398 RPL26P37-201ENST00000411983 438 ntBASIC3.99□□□□□ -1.77
RORAP35398 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.99□□□□□ -1.77
RORAP35398 RPS12P23-201ENST00000419579 400 ntBASIC3.99□□□□□ -1.77
RORAP35398 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.99□□□□□ -1.77
RORAP35398 YY1P1-201ENST00000427625 668 ntBASIC3.99□□□□□ -1.77
RORAP35398 AL606490.7-201ENST00000433136 191 ntBASIC3.99□□□□□ -1.77
RORAP35398 AL356276.2-201ENST00000435919 558 ntBASIC3.99□□□□□ -1.77
RORAP35398 AL133477.1-201ENST00000457472 514 ntBASIC3.99□□□□□ -1.77
RORAP35398 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RORAP35398 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.99□□□□□ -1.77
RORAP35398 AC012170.1-201ENST00000495139 359 ntBASIC3.99□□□□□ -1.77
RORAP35398 AC108064.1-201ENST00000513791 460 ntBASIC3.99□□□□□ -1.77
RORAP35398 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.99□□□□□ -1.77
RORAP35398 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.99□□□□□ -1.77
RORAP35398 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.99□□□□□ -1.77
RORAP35398 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.99□□□□□ -1.77
RORAP35398 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.99□□□□□ -1.77
RORAP35398 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.99□□□□□ -1.77
RORAP35398 AC107016.1-201ENST00000550463 337 ntBASIC3.99□□□□□ -1.77
RORAP35398 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.99□□□□□ -1.77
RORAP35398 VN1R79P-201ENST00000593540 513 ntBASIC3.99□□□□□ -1.77
RORAP35398 AC245128.3-201ENST00000594721 748 ntBASIC3.99□□□□□ -1.77
RORAP35398 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.99□□□□□ -1.77
RORAP35398 AC084036.1-201ENST00000609190 508 ntBASIC3.99□□□□□ -1.77
RORAP35398 AC243654.2-201ENST00000612843 443 ntBASIC3.99□□□□□ -1.77
RORAP35398 AC016911.1-201ENST00000613297 452 ntBASIC3.99□□□□□ -1.77
RORAP35398 AC023509.5-201ENST00000617434 807 ntBASIC3.99□□□□□ -1.77
RORAP35398 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RORAP35398 AC010608.2-201ENST00000624830 470 ntBASIC3.99□□□□□ -1.77
RORAP35398 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.99□□□□□ -1.77
RORAP35398 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RORAP35398 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 AC097504.1-201ENST00000515103 2415 ntBASIC3.99□□□□□ -1.77
RORAP35398 AC095050.2-201ENST00000510748 1458 ntBASIC3.98□□□□□ -1.77
RORAP35398 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RORAP35398 RNA5SP283-201ENST00000365604 119 ntBASIC3.98□□□□□ -1.77
RORAP35398 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.98□□□□□ -1.77
RORAP35398 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 ENSAP1-201ENST00000392855 326 ntBASIC3.98□□□□□ -1.77
RORAP35398 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 AL512504.1-201ENST00000415494 778 ntBASIC3.98□□□□□ -1.77
RORAP35398 AC108032.1-201ENST00000416706 207 ntBASIC3.98□□□□□ -1.77
RORAP35398 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.98□□□□□ -1.77
RORAP35398 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.98□□□□□ -1.77
RORAP35398 CYP4F29P-201ENST00000420685 446 ntBASIC3.98□□□□□ -1.77
RORAP35398 AL117339.2-201ENST00000430475 180 ntBASIC3.98□□□□□ -1.77
RORAP35398 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.98□□□□□ -1.77
RORAP35398 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.98□□□□□ -1.77
RORAP35398 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.98□□□□□ -1.77
RORAP35398 AC006326.1-201ENST00000445465 787 ntBASIC3.98□□□□□ -1.77
RORAP35398 AL157827.1-201ENST00000447622 132 ntBASIC3.98□□□□□ -1.77
RORAP35398 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.98□□□□□ -1.77
RORAP35398 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.98□□□□□ -1.77
RORAP35398 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.98□□□□□ -1.77
RORAP35398 AC139783.2-201ENST00000504847 1145 ntBASIC3.98□□□□□ -1.77
RORAP35398 AC020593.1-201ENST00000507399 299 ntBASIC3.98□□□□□ -1.77
RORAP35398 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.98□□□□□ -1.77
RORAP35398 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.98□□□□□ -1.77
RORAP35398 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.98□□□□□ -1.77
RORAP35398 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.98□□□□□ -1.77
RORAP35398 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.98□□□□□ -1.77
RORAP35398 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.98□□□□□ -1.77
RORAP35398 RNU4-89P-201ENST00000607443 133 ntBASIC3.98□□□□□ -1.77
RORAP35398 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.98□□□□□ -1.77
RORAP35398 C2orf27A-204ENST00000623058 969 ntBASIC3.98□□□□□ -1.77
RORAP35398 AP003072.4-201ENST00000624580 310 ntBASIC3.98□□□□□ -1.77
RORAP35398 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.98□□□□□ -1.77
RORAP35398 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.98□□□□□ -1.77
RORAP35398 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.98□□□□□ -1.77
RORAP35398 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
RORAP35398 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RORAP35398 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RORAP35398 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RORAP35398 AC138393.1-206ENST00000540997 1886 ntBASIC3.97□□□□□ -1.77
RORAP35398 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RORAP35398 RNU1-64P-201ENST00000365443 163 ntBASIC3.97□□□□□ -1.77
RORAP35398 MIR1179-201ENST00000408703 91 ntBASIC3.97□□□□□ -1.77
RORAP35398 AMD1P2-201ENST00000412936 992 ntBASIC3.97□□□□□ -1.77
RORAP35398 RPS23P10-201ENST00000416185 486 ntBASIC3.97□□□□□ -1.77
RORAP35398 AC122718.1-201ENST00000439448 744 ntBASIC3.97□□□□□ -1.77
RORAP35398 AL353093.1-201ENST00000441292 436 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms