Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 PGBD4P8-201ENST00000412993 562 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 OR5BE1P-201ENST00000425977 939 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 RPS4XP4-201ENST00000443195 763 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.96□□□□□ -1.78
SHMT2P34897 RPL5P32-201ENST00000454085 879 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AC092691.2-201ENST00000461787 803 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.96□□□□□ -1.78
SHMT2P34897 S100A11P1-201ENST00000477525 312 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AL132838.2-201ENST00000492041 314 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.96□□□□□ -1.78
SHMT2P34897 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.96□□□□□ -1.78
SHMT2P34897 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.96□□□□□ -1.78
SHMT2P34897 AC108471.1-201ENST00000513977 287 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 RNU7-143P-201ENST00000516781 65 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 HIGD1AP18-201ENST00000520730 278 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.96□□□□□ -1.78
SHMT2P34897 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.96□□□□□ -1.78
SHMT2P34897 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.96□□□□□ -1.78
SHMT2P34897 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.96□□□□□ -1.78
SHMT2P34897 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.96□□□□□ -1.78
SHMT2P34897 AC025627.2-201ENST00000576220 160 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AC012417.1-201ENST00000582307 1039 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 MTCO3P22-201ENST00000603219 784 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AL451044.1-201ENST00000604867 238 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 MIR6867-201ENST00000610636 67 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AC104307.1-201ENST00000616142 196 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AC090246.1-201ENST00000616499 426 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AL162233.1-201ENST00000620014 944 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AC103858.2-201ENST00000621471 543 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.96□□□□□ -1.78
SHMT2P34897 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.96□□□□□ -1.78
SHMT2P34897 OR5BE1P-202ENST00000641168 1176 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 AC083899.2-201ENST00000423285 1376 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SHMT2P34897 AL031985.3-201ENST00000565390 2449 ntBASIC3.96□□□□□ -1.78
SHMT2P34897 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHMT2P34897 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
SHMT2P34897 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.96□□□□□ -1.78
SHMT2P34897 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SHMT2P34897 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHMT2P34897 CASC19-261ENST00000641853 1638 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHMT2P34897 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHMT2P34897 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.95□□□□□ -1.78
SHMT2P34897 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SHMT2P34897 SNORD35B-201ENST00000363660 87 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHMT2P34897 RNU6-225P-201ENST00000384613 103 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.95□□□□□ -1.78
SHMT2P34897 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 AC115285.1-201ENST00000424879 736 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 VDAC1P6-201ENST00000430062 855 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 AL356276.2-201ENST00000435919 558 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 AC109458.1-201ENST00000508858 316 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 RN7SKP21-201ENST00000516503 220 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 IGLVIV-53-201ENST00000520107 367 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.95□□□□□ -1.78
SHMT2P34897 DEFB109D-201ENST00000529497 240 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.95□□□□□ -1.78
SHMT2P34897 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.95□□□□□ -1.78
SHMT2P34897 AC114878.2-201ENST00000604863 1251 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 AC242628.1-201ENST00000606810 391 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 AC017076.1-201ENST00000607613 578 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 AC012467.1-201ENST00000607740 256 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 CR589904.2-201ENST00000612533 440 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 AC068724.3-201ENST00000625906 87 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 DDX6P1-205ENST00000441966 1436 ntBASIC3.95□□□□□ -1.78
SHMT2P34897 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SHMT2P34897 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHMT2P34897 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.94□□□□□ -1.78
SHMT2P34897 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHMT2P34897 RNU6-244P-201ENST00000391028 104 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 RPL21P65-201ENST00000406094 466 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 Z86062.1-201ENST00000406773 777 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 RNU6-628P-201ENST00000410675 107 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 AL358472.1-201ENST00000431295 329 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.94□□□□□ -1.78
SHMT2P34897 RPS6P12-201ENST00000432491 726 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 OR4C10P-201ENST00000434991 931 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 HMGB1P16-201ENST00000447155 540 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 NDUFS5P3-201ENST00000450668 321 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.94□□□□□ -1.78
SHMT2P34897 RN7SL271P-201ENST00000487601 295 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.94□□□□□ -1.78
SHMT2P34897 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.94□□□□□ -1.78
SHMT2P34897 KRT19P6-201ENST00000510983 209 ntBASIC3.94□□□□□ -1.78
SHMT2P34897 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.94□□□□□ -1.78
SHMT2P34897 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.94□□□□□ -1.78
SHMT2P34897 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.94□□□□□ -1.78
SHMT2P34897 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.94□□□□□ -1.78
SHMT2P34897 AC007599.1-201ENST00000568688 1174 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms