Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AC097372.4-201ENST00000625025 466 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC13P31276 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC13P31276 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC13P31276 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
HOXC13P31276 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC13P31276 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC13P31276 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC13P31276 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC13P31276 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
HOXC13P31276 AP000542.2-201ENST00000623199 6179 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AC108467.2-201ENST00000617640 1597 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 NMD3P1-201ENST00000439704 1488 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC13P31276 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC13P31276 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC13P31276 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC13P31276 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HOXC13P31276 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC13P31276 RNA5SP391-201ENST00000363456 119 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 RNA5SP151-201ENST00000365632 117 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC004987.3-201ENST00000413879 771 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 ETF1P3-201ENST00000430422 1160 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC13P31276 HMGB3P30-201ENST00000457863 606 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC13P31276 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 RPS4XP18-201ENST00000495480 763 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC13P31276 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC010306.1-201ENST00000523223 1117 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC13P31276 UBTFL9-201ENST00000534504 1148 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC13P31276 AL352979.3-201ENST00000553515 247 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC027104.1-201ENST00000563702 681 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 RPL7P50-201ENST00000600588 727 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 RPL21P136-201ENST00000605378 396 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AC112503.1-201ENST00000608436 391 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AL133243.1-201ENST00000614487 366 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 SNX18P1Y-201ENST00000616231 511 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 AL713922.2-201ENST00000619384 716 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AC109809.1-201ENST00000619665 545 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 AP005019.3-201ENST00000620418 560 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC13P31276 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC13P31276 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HOXC13P31276 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC13P31276 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC13P31276 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
HOXC13P31276 AC008725.1-201ENST00000605123 2263 ntBASIC4.69□□□□□ -1.66
HOXC13P31276 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC13P31276 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC13P31276 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC13P31276 AL672167.1-205ENST00000641112 3080 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXC13P31276 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC13P31276 RN7SKP280-201ENST00000364196 304 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 RNA5SP167-201ENST00000365461 116 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 MIR23A-201ENST00000385245 73 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 RNU2-6P-201ENST00000411404 190 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 NUP35P2-201ENST00000416748 943 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC13P31276 AC093422.3-201ENST00000428506 305 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 BMS1P19-201ENST00000433925 393 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 RPS3AP54-201ENST00000435535 734 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC13P31276 RPL6P5-201ENST00000445678 828 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AL359073.1-201ENST00000448036 403 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 RPL7P19-201ENST00000469948 618 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC13P31276 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXC13P31276 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC13P31276 FTH1P9-201ENST00000513251 355 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 RN7SKP96-201ENST00000516948 297 ntBASIC4.68□□□□□ -1.66
HOXC13P31276 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC13P31276 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms