Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU6-98P-201ENST00000384173 107 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 ATF1P1-201ENST00000406040 927 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 MIR1303-201ENST00000408625 86 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 RN7SKP182-201ENST00000410772 298 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC8P31273 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC8P31273 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC8P31273 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC8P31273 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC8P31273 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC8P31273 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC8P31273 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC8P31273 AL357520.1-201ENST00000441557 453 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC8P31273 RPL7P55-201ENST00000450522 746 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 TRBV8-2-201ENST00000475637 270 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 RPL21P129-201ENST00000491732 478 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 TPT1P3-201ENST00000492841 512 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.73□□□□□ -1.65
HOXC8P31273 PGBD4P4-201ENST00000509673 613 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC8P31273 RNA5SP360-201ENST00000516555 118 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 AC105233.3-201ENST00000531125 744 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 UBTFL9-201ENST00000534504 1148 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC8P31273 MTND4LP24-201ENST00000572277 291 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC8P31273 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC8P31273 AL158050.2-201ENST00000605336 568 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 MIR7151-201ENST00000617477 60 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 AC095038.2-201ENST00000621464 1070 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC8P31273 AL356118.1-201ENST00000635272 1078 ntBASIC4.73□□□□□ -1.65
HOXC8P31273 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC8P31273 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
HOXC8P31273 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC8P31273 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC8P31273 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC8P31273 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC8P31273 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
HOXC8P31273 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC8P31273 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC8P31273 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXC8P31273 SNORA48.7-201ENST00000391302 135 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 ENSAP1-201ENST00000392855 326 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXC8P31273 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC8P31273 AC023128.2-201ENST00000420880 1223 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC8P31273 VN1R42P-201ENST00000424651 344 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 GEMIN8P3-201ENST00000445417 720 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC8P31273 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC8P31273 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC8P31273 AL445433.1-201ENST00000457507 257 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC8P31273 RPL23AP37-201ENST00000479658 549 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC8P31273 RNU6-334P-201ENST00000517072 102 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 HMGB1P19-201ENST00000517578 577 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC8P31273 COX6B1P6-201ENST00000522347 255 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC022882.1-201ENST00000532142 501 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC8P31273 DYNLL1P4-201ENST00000549314 266 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 LSM3P2-201ENST00000551246 273 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC8P31273 AL352979.3-201ENST00000553515 247 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC090751.1-201ENST00000566966 267 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 AC096947.1-201ENST00000603233 470 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 Z98200.1-201ENST00000607298 470 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC027449.1-201ENST00000608890 407 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 RMST_10.1-201ENST00000616309 154 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC034229.5-201ENST00000624258 185 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 AC010608.2-201ENST00000624830 470 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 CDRT1-208ENST00000630868 794 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC8P31273 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC8P31273 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 AC000123.3-201ENST00000624029 4975 ntBASIC4.72□□□□□ -1.65
HOXC8P31273 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC8P31273 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC8P31273 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
HOXC8P31273 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.71□□□□□ -1.65
HOXC8P31273 A2MP1-204ENST00000566278 4130 ntBASIC4.71□□□□□ -1.65
HOXC8P31273 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HOXC8P31273 AC006971.1-201ENST00000407916 4486 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC8P31273 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC8P31273 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms