Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL035461.2-201ENST00000619201 524 ntBASIC3.95□□□□□ -1.78
SHC1P29353 AC010435.1-201ENST00000623353 1177 ntBASIC3.95□□□□□ -1.78
SHC1P29353 AC093875.1-201ENST00000623688 504 ntBASIC3.95□□□□□ -1.78
SHC1P29353 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.95□□□□□ -1.78
SHC1P29353 AC019226.2-201ENST00000625973 424 ntBASIC3.95□□□□□ -1.78
SHC1P29353 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHC1P29353 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SHC1P29353 BX005019.1-201ENST00000561881 1810 ntBASIC3.95□□□□□ -1.78
SHC1P29353 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHC1P29353 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHC1P29353 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 CCT8P1-201ENST00000413611 1657 ntBASIC3.94□□□□□ -1.78
SHC1P29353 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 RNA5SP307-201ENST00000362863 116 ntBASIC3.94□□□□□ -1.78
SHC1P29353 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 RNU6-207P-201ENST00000384137 107 ntBASIC3.94□□□□□ -1.78
SHC1P29353 RNU6-178P-201ENST00000384631 104 ntBASIC3.94□□□□□ -1.78
SHC1P29353 MIR141-201ENST00000384975 95 ntBASIC3.94□□□□□ -1.78
SHC1P29353 MIR3065-201ENST00000390137 79 ntBASIC3.94□□□□□ -1.78
SHC1P29353 NCSTNP1-201ENST00000406229 144 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AL034374.1-201ENST00000406329 351 ntBASIC3.94□□□□□ -1.78
SHC1P29353 RNU4-25P-201ENST00000410569 230 ntBASIC3.94□□□□□ -1.78
SHC1P29353 RNA5SP104-201ENST00000410989 118 ntBASIC3.94□□□□□ -1.78
SHC1P29353 SNORA74C-2-201ENST00000411179 201 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC016397.1-201ENST00000412463 242 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AL592310.1-201ENST00000414330 671 ntBASIC3.94□□□□□ -1.78
SHC1P29353 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.94□□□□□ -1.78
SHC1P29353 MTND2P16-201ENST00000419987 799 ntBASIC3.94□□□□□ -1.78
SHC1P29353 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.94□□□□□ -1.78
SHC1P29353 PTP4A1P7-201ENST00000423476 514 ntBASIC3.94□□□□□ -1.78
SHC1P29353 CETN4P-201ENST00000432407 469 ntBASIC3.94□□□□□ -1.78
SHC1P29353 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.94□□□□□ -1.78
SHC1P29353 RPS3AP54-201ENST00000435535 734 ntBASIC3.94□□□□□ -1.78
SHC1P29353 MTCYBP29-201ENST00000436327 1006 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.94□□□□□ -1.78
SHC1P29353 CACYBPP1-201ENST00000438592 684 ntBASIC3.94□□□□□ -1.78
SHC1P29353 MED6P1-201ENST00000439659 713 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AL353748.1-201ENST00000440753 474 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC114495.1-201ENST00000441274 436 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 EIF2S2P2-201ENST00000447161 982 ntBASIC3.94□□□□□ -1.78
SHC1P29353 FGF7P3-201ENST00000454645 303 ntBASIC3.94□□□□□ -1.78
SHC1P29353 MTCO2P6-201ENST00000463134 685 ntBASIC3.94□□□□□ -1.78
SHC1P29353 RPL35AP15-201ENST00000468042 339 ntBASIC3.94□□□□□ -1.78
SHC1P29353 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 PRELID3BP5-201ENST00000508612 460 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC002456.2-201ENST00000509356 380 ntBASIC3.94□□□□□ -1.78
SHC1P29353 HPRT1P1-201ENST00000509498 657 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.94□□□□□ -1.78
SHC1P29353 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.94□□□□□ -1.78
SHC1P29353 AC091163.3-201ENST00000518269 1144 ntBASIC3.94□□□□□ -1.78
SHC1P29353 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.94□□□□□ -1.78
SHC1P29353 AP001636.2-201ENST00000525517 696 ntBASIC3.94□□□□□ -1.78
SHC1P29353 OR5BC1P-201ENST00000529327 739 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC009643.1-201ENST00000532030 391 ntBASIC3.94□□□□□ -1.78
SHC1P29353 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 AC104229.1-201ENST00000561364 255 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.94□□□□□ -1.78
SHC1P29353 AC124068.1-201ENST00000563131 678 ntBASIC3.94□□□□□ -1.78
SHC1P29353 MTCO2P22-201ENST00000603246 681 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC005191.1-201ENST00000603950 358 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AL160237.3-201ENST00000604114 1013 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AP004372.1-201ENST00000604842 844 ntBASIC3.94□□□□□ -1.78
SHC1P29353 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 AC097065.2-201ENST00000608159 533 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC007546.1-201ENST00000619452 559 ntBASIC3.94□□□□□ -1.78
SHC1P29353 Z99129.2-201ENST00000619967 314 ntBASIC3.94□□□□□ -1.78
SHC1P29353 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 AC022079.1-201ENST00000621546 602 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC004777.1-201ENST00000624317 287 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC011944.2-201ENST00000624440 683 ntBASIC3.94□□□□□ -1.78
SHC1P29353 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SHC1P29353 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.94□□□□□ -1.78
SHC1P29353 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHC1P29353 AL450326.2-201ENST00000421913 1962 ntBASIC3.94□□□□□ -1.78
SHC1P29353 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.94□□□□□ -1.78
SHC1P29353 AC092079.1-201ENST00000558620 1985 ntBASIC3.93□□□□□ -1.78
SHC1P29353 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHC1P29353 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SHC1P29353 RAD1P1-201ENST00000231383 813 ntBASIC3.93□□□□□ -1.78
SHC1P29353 RNU5B-4P-201ENST00000363508 111 ntBASIC3.93□□□□□ -1.78
SHC1P29353 RNA5SP509-201ENST00000364577 119 ntBASIC3.93□□□□□ -1.78
SHC1P29353 RNA5SP513-201ENST00000364648 118 ntBASIC3.93□□□□□ -1.78
SHC1P29353 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SHC1P29353 RNU6-468P-201ENST00000384003 109 ntBASIC3.93□□□□□ -1.78
SHC1P29353 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHC1P29353 NRBF2P2-201ENST00000413087 861 ntBASIC3.93□□□□□ -1.78
SHC1P29353 AL160175.1-201ENST00000428124 247 ntBASIC3.93□□□□□ -1.78
SHC1P29353 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.93□□□□□ -1.78
SHC1P29353 RPS29P17-201ENST00000430795 166 ntBASIC3.93□□□□□ -1.78
SHC1P29353 PRELID3BP10-201ENST00000431957 584 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms