Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.83□□□□□ -1.32
RFX1P22670 RPS27AP18-201ENST00000515536 459 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 OR5AN2P-201ENST00000534535 896 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC123904.2-201ENST00000548059 300 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.83□□□□□ -1.32
RFX1P22670 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.83□□□□□ -1.32
RFX1P22670 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.83□□□□□ -1.32
RFX1P22670 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.83□□□□□ -1.32
RFX1P22670 MIR3189-201ENST00000578735 73 ntBASIC6.83□□□□□ -1.32
RFX1P22670 MIR3118-1-201ENST00000581787 76 ntBASIC6.83□□□□□ -1.32
RFX1P22670 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.83□□□□□ -1.32
RFX1P22670 NF1P5-201ENST00000588287 448 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC044792.1-201ENST00000593294 196 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC073046.2-201ENST00000604756 527 ntBASIC6.83□□□□□ -1.32
RFX1P22670 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC008966.2-201ENST00000606157 453 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RFX1P22670 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
RFX1P22670 AL592148.3-201ENST00000608771 2646 ntBASIC6.83□□□□□ -1.32
RFX1P22670 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 AC009229.4-201ENST00000623854 1947 ntBASIC6.83□□□□□ -1.32
RFX1P22670 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.83□□□□□ -1.32
RFX1P22670 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.83□□□□□ -1.32
RFX1P22670 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
RFX1P22670 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 GUCY1B2-204ENST00000531898 1979 ntBASIC6.82□□□□□ -1.32
RFX1P22670 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.82□□□□□ -1.32
RFX1P22670 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 NUP58P1-201ENST00000502546 1738 ntBASIC6.82□□□□□ -1.32
RFX1P22670 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 OR5J1P-201ENST00000313544 939 ntBASIC6.82□□□□□ -1.32
RFX1P22670 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 RNU6-28P-201ENST00000362378 107 ntBASIC6.82□□□□□ -1.32
RFX1P22670 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 Y_RNA.509-201ENST00000384506 99 ntBASIC6.82□□□□□ -1.32
RFX1P22670 RPS4XP8-201ENST00000402039 771 ntBASIC6.82□□□□□ -1.32
RFX1P22670 AL359704.1-201ENST00000411586 781 ntBASIC6.82□□□□□ -1.32
RFX1P22670 AC017035.1-201ENST00000411999 1115 ntBASIC6.82□□□□□ -1.32
RFX1P22670 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.82□□□□□ -1.32
RFX1P22670 AC073136.2-201ENST00000417282 849 ntBASIC6.82□□□□□ -1.32
RFX1P22670 RPL21P50-201ENST00000417698 477 ntBASIC6.82□□□□□ -1.32
RFX1P22670 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.82□□□□□ -1.32
RFX1P22670 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.82□□□□□ -1.32
RFX1P22670 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.82□□□□□ -1.32
RFX1P22670 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.82□□□□□ -1.32
RFX1P22670 SDCBPP1-201ENST00000440192 890 ntBASIC6.82□□□□□ -1.32
RFX1P22670 AC005297.2-201ENST00000450430 606 ntBASIC6.82□□□□□ -1.32
RFX1P22670 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.82□□□□□ -1.32
RFX1P22670 AC104073.1-201ENST00000451988 151 ntBASIC6.82□□□□□ -1.32
RFX1P22670 VPS25P1-201ENST00000455691 508 ntBASIC6.82□□□□□ -1.32
RFX1P22670 RN7SL174P-201ENST00000475578 289 ntBASIC6.82□□□□□ -1.32
RFX1P22670 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.82□□□□□ -1.32
RFX1P22670 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.82□□□□□ -1.32
RFX1P22670 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 MIR4504-201ENST00000577413 92 ntBASIC6.82□□□□□ -1.32
RFX1P22670 MIR3167-201ENST00000579623 85 ntBASIC6.82□□□□□ -1.32
RFX1P22670 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 AC087283.1-201ENST00000604029 1074 ntBASIC6.82□□□□□ -1.32
RFX1P22670 BNIP3P10-201ENST00000605360 577 ntBASIC6.82□□□□□ -1.32
RFX1P22670 AC055876.5-201ENST00000605667 259 ntBASIC6.82□□□□□ -1.32
RFX1P22670 RPSAP75-201ENST00000605848 301 ntBASIC6.82□□□□□ -1.32
RFX1P22670 AC116447.1-201ENST00000613153 453 ntBASIC6.82□□□□□ -1.32
RFX1P22670 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RFX1P22670 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 AC010928.1-201ENST00000592477 1447 ntBASIC6.82□□□□□ -1.32
RFX1P22670 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RFX1P22670 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
RFX1P22670 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.81□□□□□ -1.32
RFX1P22670 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.81□□□□□ -1.32
RFX1P22670 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RFX1P22670 AC092125.1-201ENST00000562568 1995 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms