Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH3P22223 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.7
CDH3P22223 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.4□□□□□ -1.7
CDH3P22223 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH3P22223 MFSD8-220ENST00000641243 1422 ntBASIC4.4□□□□□ -1.7
CDH3P22223 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH3P22223 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH3P22223 SDHCP2-201ENST00000398565 501 ntBASIC4.4□□□□□ -1.71
CDH3P22223 RNA5SP39-201ENST00000411245 120 ntBASIC4.4□□□□□ -1.71
CDH3P22223 VTA1P1-201ENST00000414044 866 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH3P22223 RPS27AP7-201ENST00000422792 455 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC016712.1-201ENST00000431088 378 ntBASIC4.4□□□□□ -1.71
CDH3P22223 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.4□□□□□ -1.71
CDH3P22223 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH3P22223 AL353093.1-201ENST00000441292 436 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH3P22223 TDGF1P1-201ENST00000445734 527 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC092685.1-201ENST00000447960 1243 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH3P22223 AL096803.2-201ENST00000450032 677 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AL935212.3-201ENST00000450729 284 ntBASIC4.4□□□□□ -1.71
CDH3P22223 Z95152.1-201ENST00000453556 656 ntBASIC4.4□□□□□ -1.71
CDH3P22223 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH3P22223 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH3P22223 TPT1P3-201ENST00000492841 512 ntBASIC4.4□□□□□ -1.71
CDH3P22223 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH3P22223 AC069306.1-201ENST00000507006 843 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH3P22223 PPBPP1-201ENST00000510807 373 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC015795.1-201ENST00000513669 327 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH3P22223 AC022790.1-201ENST00000522872 204 ntBASIC4.4□□□□□ -1.71
CDH3P22223 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CDH3P22223 AC087894.1-201ENST00000538359 518 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH3P22223 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH3P22223 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH3P22223 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH3P22223 YWHAZP1-201ENST00000556286 722 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH3P22223 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH3P22223 MIR4277-201ENST00000578298 84 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH3P22223 MIR378J-201ENST00000611988 109 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AL512427.1-201ENST00000618593 349 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH3P22223 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH3P22223 AL359757.1-201ENST00000623176 255 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC090772.4-201ENST00000623599 362 ntBASIC4.4□□□□□ -1.71
CDH3P22223 AC010608.3-201ENST00000625048 527 ntBASIC4.4□□□□□ -1.71
CDH3P22223 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH3P22223 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CDH3P22223 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH3P22223 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH3P22223 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH3P22223 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH3P22223 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH3P22223 RAD17P1-201ENST00000418130 2042 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AC139713.2-214ENST00000642059 1811 ntBASIC4.39□□□□□ -1.71
CDH3P22223 HSPD1P14-201ENST00000432666 1618 ntBASIC4.39□□□□□ -1.71
CDH3P22223 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH3P22223 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CDH3P22223 AC016588.2-201ENST00000632484 3021 ntBASIC4.39□□□□□ -1.71
CDH3P22223 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH3P22223 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH3P22223 RNA5SP447-201ENST00000363749 119 ntBASIC4.39□□□□□ -1.71
CDH3P22223 HMGB3P18-201ENST00000406327 590 ntBASIC4.39□□□□□ -1.71
CDH3P22223 TCEA1P4-201ENST00000415066 844 ntBASIC4.39□□□□□ -1.71
CDH3P22223 LINC01881-201ENST00000416103 412 ntBASIC4.39□□□□□ -1.71
CDH3P22223 RAC1P3-201ENST00000416129 580 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AC073310.1-201ENST00000423226 1033 ntBASIC4.39□□□□□ -1.71
CDH3P22223 RPL7AP25-201ENST00000423357 805 ntBASIC4.39□□□□□ -1.71
CDH3P22223 RPL30P3-201ENST00000424262 333 ntBASIC4.39□□□□□ -1.71
CDH3P22223 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH3P22223 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.39□□□□□ -1.71
CDH3P22223 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH3P22223 RPL21P126-201ENST00000470049 478 ntBASIC4.39□□□□□ -1.71
CDH3P22223 HPRT1P1-201ENST00000509498 657 ntBASIC4.39□□□□□ -1.71
CDH3P22223 RNU6-415P-201ENST00000516252 97 ntBASIC4.39□□□□□ -1.71
CDH3P22223 IGKV2D-10-201ENST00000520194 281 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH3P22223 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
CDH3P22223 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH3P22223 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH3P22223 AC135001.1-201ENST00000544546 283 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AC025260.1-201ENST00000548858 430 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AL161713.1-201ENST00000555538 145 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH3P22223 AL391001.1-201ENST00000602747 715 ntBASIC4.39□□□□□ -1.71
CDH3P22223 COX6CP4-201ENST00000605798 228 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH3P22223 AC124016.2-201ENST00000610058 665 ntBASIC4.39□□□□□ -1.71
CDH3P22223 FRG1HP-204ENST00000617940 757 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AC006927.2-201ENST00000639256 389 ntBASIC4.39□□□□□ -1.71
CDH3P22223 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH3P22223 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH3P22223 AL355852.1-201ENST00000454081 1771 ntBASIC4.39□□□□□ -1.71
CDH3P22223 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms