Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ATF4P18848 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 OR5J1P-201ENST00000313544 939 ntBASIC5.44□□□□□ -1.54
ATF4P18848 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 Y_RNA.89-201ENST00000363031 102 ntBASIC5.44□□□□□ -1.54
ATF4P18848 Y_RNA.390-201ENST00000383932 102 ntBASIC5.44□□□□□ -1.54
ATF4P18848 RNU6-483P-201ENST00000384088 108 ntBASIC5.44□□□□□ -1.54
ATF4P18848 RNU6-356P-201ENST00000384140 107 ntBASIC5.44□□□□□ -1.54
ATF4P18848 MIR431-201ENST00000385266 114 ntBASIC5.44□□□□□ -1.54
ATF4P18848 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ATF4P18848 PSMA6P1-201ENST00000400275 741 ntBASIC5.44□□□□□ -1.54
ATF4P18848 FGF7P8-201ENST00000402994 292 ntBASIC5.44□□□□□ -1.54
ATF4P18848 RAP1BP3-201ENST00000407180 549 ntBASIC5.44□□□□□ -1.54
ATF4P18848 RPS3AP24-201ENST00000407896 734 ntBASIC5.44□□□□□ -1.54
ATF4P18848 RPL35AP24-201ENST00000413846 330 ntBASIC5.44□□□□□ -1.54
ATF4P18848 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 HMGB3P20-201ENST00000417997 600 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 ATP5LP4-201ENST00000434169 307 ntBASIC5.44□□□□□ -1.54
ATF4P18848 MRPL48P1-201ENST00000445390 636 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AC079781.2-201ENST00000446424 169 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 CEACAMP6-201ENST00000452007 574 ntBASIC5.44□□□□□ -1.54
ATF4P18848 RN7SL72P-201ENST00000460697 269 ntBASIC5.44□□□□□ -1.54
ATF4P18848 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 RNU6-1281P-201ENST00000516223 105 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 HMGN1P28-201ENST00000521340 364 ntBASIC5.44□□□□□ -1.54
ATF4P18848 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.44□□□□□ -1.54
ATF4P18848 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
ATF4P18848 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.44□□□□□ -1.54
ATF4P18848 AP003072.2-201ENST00000527756 676 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 LINC00622-201ENST00000562811 1570 ntBASIC5.44□□□□□ -1.54
ATF4P18848 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF4P18848 RN7SL667P-201ENST00000582817 298 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AC018809.2-201ENST00000602436 3823 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 NRBF2P5-201ENST00000603087 788 ntBASIC5.44□□□□□ -1.54
ATF4P18848 COX6CP16-201ENST00000603667 216 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AC024085.1-201ENST00000604299 432 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AL162431.4-201ENST00000604674 411 ntBASIC5.44□□□□□ -1.54
ATF4P18848 AP001330.5-201ENST00000607176 411 ntBASIC5.44□□□□□ -1.54
ATF4P18848 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.44□□□□□ -1.54
ATF4P18848 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF4P18848 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.44□□□□□ -1.54
ATF4P18848 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 CR848007.1-201ENST00000442354 1699 ntBASIC5.43□□□□□ -1.54
ATF4P18848 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 AL358913.2-201ENST00000553881 1548 ntBASIC5.43□□□□□ -1.54
ATF4P18848 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 SOCS5P3-201ENST00000425115 1576 ntBASIC5.43□□□□□ -1.54
ATF4P18848 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.43□□□□□ -1.54
ATF4P18848 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 RNU6-989P-201ENST00000362756 107 ntBASIC5.43□□□□□ -1.54
ATF4P18848 RNU6-1120P-201ENST00000362988 108 ntBASIC5.43□□□□□ -1.54
ATF4P18848 RNU6-169P-201ENST00000365336 107 ntBASIC5.43□□□□□ -1.54
ATF4P18848 RNY3P13-201ENST00000365542 102 ntBASIC5.43□□□□□ -1.54
ATF4P18848 RNU6-108P-201ENST00000365558 107 ntBASIC5.43□□□□□ -1.54
ATF4P18848 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 SNORA70.8-201ENST00000384231 136 ntBASIC5.43□□□□□ -1.54
ATF4P18848 MIR19A-201ENST00000384878 82 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AL139135.1-201ENST00000412675 209 ntBASIC5.43□□□□□ -1.54
ATF4P18848 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 UQCRBP1-201ENST00000421129 336 ntBASIC5.43□□□□□ -1.54
ATF4P18848 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.43□□□□□ -1.54
ATF4P18848 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 CKS1BP5-201ENST00000434172 273 ntBASIC5.43□□□□□ -1.54
ATF4P18848 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.43□□□□□ -1.54
ATF4P18848 FTH1P1-201ENST00000437933 532 ntBASIC5.43□□□□□ -1.54
ATF4P18848 MTND6P18-201ENST00000439477 513 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.43□□□□□ -1.54
ATF4P18848 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.43□□□□□ -1.54
ATF4P18848 AC140076.1-201ENST00000449897 361 ntBASIC5.43□□□□□ -1.54
ATF4P18848 RNU7-59P-201ENST00000459101 61 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC008620.1-201ENST00000468453 592 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC114728.1-201ENST00000488289 483 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.43□□□□□ -1.54
ATF4P18848 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms