Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 TAF13P2-201ENST00000416876 286 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.15□□□□□ -1.75
LMX1BO60663 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.15□□□□□ -1.75
LMX1BO60663 RPL7P57-201ENST00000423238 740 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AL645608.4-201ENST00000423619 154 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 HSPE1P16-201ENST00000426640 348 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 MTND1P32-201ENST00000433043 938 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 RPS17P8-201ENST00000434525 335 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AL451139.1-201ENST00000434718 346 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.15□□□□□ -1.75
LMX1BO60663 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.15□□□□□ -1.75
LMX1BO60663 ATP5C1P1-201ENST00000441945 895 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC097499.1-201ENST00000444277 208 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.15□□□□□ -1.75
LMX1BO60663 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.15□□□□□ -1.75
LMX1BO60663 AC104978.1-201ENST00000449387 391 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AL591623.2-201ENST00000449978 222 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 CDC42P1-201ENST00000456658 548 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.15□□□□□ -1.75
LMX1BO60663 AC091860.1-201ENST00000505723 432 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.15□□□□□ -1.75
LMX1BO60663 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.15□□□□□ -1.75
LMX1BO60663 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.15□□□□□ -1.75
LMX1BO60663 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.15□□□□□ -1.75
LMX1BO60663 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMX1BO60663 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.15□□□□□ -1.75
LMX1BO60663 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.15□□□□□ -1.75
LMX1BO60663 PARP1P2-201ENST00000556806 195 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 DPRXP4-201ENST00000578053 568 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC022662.1-201ENST00000580252 331 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC103987.3-201ENST00000582071 292 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.15□□□□□ -1.75
LMX1BO60663 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.15□□□□□ -1.75
LMX1BO60663 RPL26P30-202ENST00000602923 645 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC234782.5-201ENST00000617723 324 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 MIR7703-201ENST00000620784 77 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC092608.3-201ENST00000625017 386 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.15□□□□□ -1.75
LMX1BO60663 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.15□□□□□ -1.75
LMX1BO60663 OR8B1P-202ENST00000641132 1178 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMX1BO60663 AC006042.3-201ENST00000454684 1469 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AL359922.3-201ENST00000624779 1670 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
LMX1BO60663 TLK1P1-201ENST00000456760 2440 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMX1BO60663 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMX1BO60663 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LMX1BO60663 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMX1BO60663 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMX1BO60663 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.14□□□□□ -1.75
LMX1BO60663 SAMMSON-226ENST00000642089 1582 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 AC099654.2-201ENST00000433031 1980 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.14□□□□□ -1.75
LMX1BO60663 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LMX1BO60663 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 RNU4-24P-201ENST00000364565 139 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMX1BO60663 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LMX1BO60663 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LMX1BO60663 Y_RNA.505-201ENST00000384489 102 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 RNU6-244P-201ENST00000391028 104 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 BTF3L4P1-201ENST00000413813 468 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 OR4K6P-201ENST00000416478 897 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 P2RY10P2-201ENST00000416730 913 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 Z75741.2-201ENST00000417272 1167 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC069213.2-201ENST00000420238 366 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 AL365203.2-201ENST00000423444 196 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC012519.1-201ENST00000424588 610 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 FO393419.3-201ENST00000428741 282 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 RPL7P11-201ENST00000437586 658 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.14□□□□□ -1.75
LMX1BO60663 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 MTND5P2-201ENST00000442927 1142 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC010733.1-201ENST00000451515 401 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.14□□□□□ -1.75
LMX1BO60663 MTCO3P16-201ENST00000454456 754 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.14□□□□□ -1.75
LMX1BO60663 AC011005.3-201ENST00000491624 395 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.14□□□□□ -1.75
LMX1BO60663 IGBP1P5-201ENST00000507524 1000 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC111000.2-201ENST00000507775 550 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC008565.1-201ENST00000509046 885 ntBASIC4.14□□□□□ -1.75
LMX1BO60663 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms