Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.01□□□□□ -1.61
PROM1O43490 AL512329.2-201ENST00000607350 548 ntBASIC5.01□□□□□ -1.61
PROM1O43490 RPSAP73-201ENST00000614820 330 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AC023158.2-201ENST00000614876 543 ntBASIC5.01□□□□□ -1.61
PROM1O43490 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.01□□□□□ -1.61
PROM1O43490 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.01□□□□□ -1.61
PROM1O43490 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.01□□□□□ -1.61
PROM1O43490 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 Z95331.1-201ENST00000623075 23112 ntBASIC5□□□□□ -1.61
PROM1O43490 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5□□□□□ -1.61
PROM1O43490 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 AC104118.1-201ENST00000607625 1589 ntBASIC5□□□□□ -1.61
PROM1O43490 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PROM1O43490 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5□□□□□ -1.61
PROM1O43490 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
PROM1O43490 AC005294.1-201ENST00000355509 281 ntBASIC5□□□□□ -1.61
PROM1O43490 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 Y_RNA.3-201ENST00000362331 103 ntBASIC5□□□□□ -1.61
PROM1O43490 RNU4-44P-201ENST00000363050 141 ntBASIC5□□□□□ -1.61
PROM1O43490 RN7SKP115-201ENST00000363177 317 ntBASIC5□□□□□ -1.61
PROM1O43490 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5□□□□□ -1.61
PROM1O43490 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5□□□□□ -1.61
PROM1O43490 AL133270.1-201ENST00000402635 279 ntBASIC5□□□□□ -1.61
PROM1O43490 RNU6-603P-201ENST00000411403 107 ntBASIC5□□□□□ -1.61
PROM1O43490 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5□□□□□ -1.61
PROM1O43490 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5□□□□□ -1.61
PROM1O43490 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5□□□□□ -1.61
PROM1O43490 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 GAPDHP49-201ENST00000421421 961 ntBASIC5□□□□□ -1.61
PROM1O43490 MTCYBP5-201ENST00000423752 1135 ntBASIC5□□□□□ -1.61
PROM1O43490 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 AL139148.1-201ENST00000427122 680 ntBASIC5□□□□□ -1.61
PROM1O43490 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5□□□□□ -1.61
PROM1O43490 RPL7L1P9-201ENST00000431298 745 ntBASIC5□□□□□ -1.61
PROM1O43490 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 CDC27P1-201ENST00000445384 715 ntBASIC5□□□□□ -1.61
PROM1O43490 NOP56P2-201ENST00000447491 769 ntBASIC5□□□□□ -1.61
PROM1O43490 RFC5P1-201ENST00000454419 874 ntBASIC5□□□□□ -1.61
PROM1O43490 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5□□□□□ -1.61
PROM1O43490 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AC072039.1-201ENST00000477611 581 ntBASIC5□□□□□ -1.61
PROM1O43490 RPL7P39-201ENST00000481157 744 ntBASIC5□□□□□ -1.61
PROM1O43490 VPS26AP1-201ENST00000483197 979 ntBASIC5□□□□□ -1.61
PROM1O43490 RPL7P41-201ENST00000485823 957 ntBASIC5□□□□□ -1.61
PROM1O43490 AC004453.1-201ENST00000487895 408 ntBASIC5□□□□□ -1.61
PROM1O43490 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 AC109927.2-201ENST00000506416 303 ntBASIC5□□□□□ -1.61
PROM1O43490 AC010460.1-201ENST00000507087 466 ntBASIC5□□□□□ -1.61
PROM1O43490 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5□□□□□ -1.61
PROM1O43490 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5□□□□□ -1.61
PROM1O43490 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5□□□□□ -1.61
PROM1O43490 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5□□□□□ -1.61
PROM1O43490 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AC018552.3-201ENST00000567416 561 ntBASIC5□□□□□ -1.61
PROM1O43490 OR4K7P-201ENST00000580232 945 ntBASIC5□□□□□ -1.61
PROM1O43490 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AP005262.1-201ENST00000582646 997 ntBASIC5□□□□□ -1.61
PROM1O43490 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AC009597.2-201ENST00000604659 592 ntBASIC5□□□□□ -1.61
PROM1O43490 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5□□□□□ -1.61
PROM1O43490 AC022306.2-201ENST00000617563 647 ntBASIC5□□□□□ -1.61
PROM1O43490 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5□□□□□ -1.61
PROM1O43490 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5□□□□□ -1.61
PROM1O43490 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5□□□□□ -1.61
PROM1O43490 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
PROM1O43490 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PROM1O43490 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5□□□□□ -1.61
PROM1O43490 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms