Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 OR5BR1P-201ENST00000524992 1330 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHGDHO43175 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 STX3-208ENST00000641815 3236 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PHGDHO43175 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHGDHO43175 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHGDHO43175 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PHGDHO43175 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHGDHO43175 OR4A15-201ENST00000314706 1035 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 U3.2-201ENST00000362981 210 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 RNU6-1293P-201ENST00000384077 107 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 RNU6-146P-201ENST00000384602 108 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 MIR506-201ENST00000384998 124 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AC013442.1-201ENST00000397347 228 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 USP9YP33-201ENST00000412220 421 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 RPL12P34-201ENST00000424532 479 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 VDAC1P6-201ENST00000430062 855 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.04□□□□□ -1.6
PHGDHO43175 RPL36P19-201ENST00000430744 301 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 USP9YP35-201ENST00000435696 412 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 GSTA7P-201ENST00000438425 448 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.04□□□□□ -1.6
PHGDHO43175 EEF1B2P5-201ENST00000444820 548 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 SLC31A1P1-201ENST00000451221 567 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 AL645937.3-201ENST00000453647 936 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AL356981.1-201ENST00000454879 684 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 RN7SL443P-201ENST00000464331 290 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 RPL7P1-201ENST00000468161 747 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 RPL7P9-201ENST00000468715 747 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 CCDC75P1-201ENST00000469247 791 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHGDHO43175 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AC007954.1-201ENST00000554198 494 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 NBR2-204ENST00000587322 63 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.04□□□□□ -1.6
PHGDHO43175 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 AC069304.2-201ENST00000605154 435 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 AP001521.1-201ENST00000609150 300 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 RNU6-156P-201ENST00000621869 107 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AC139792.2-201ENST00000624218 587 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 AC092184.1-201ENST00000625042 715 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 FP325313.1-201ENST00000638228 703 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PHGDHO43175 CYP1D1P-201ENST00000416662 1433 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 AC011493.1-201ENST00000596753 1632 ntBASIC5.04□□□□□ -1.6
PHGDHO43175 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHGDHO43175 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.04□□□□□ -1.6
PHGDHO43175 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHGDHO43175 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHGDHO43175 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.03□□□□□ -1.6
PHGDHO43175 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHGDHO43175 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHGDHO43175 SAMMSON-213ENST00000641336 1521 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 AC011477.1-204ENST00000623416 1325 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.03□□□□□ -1.6
PHGDHO43175 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PHGDHO43175 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PHGDHO43175 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHGDHO43175 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.03□□□□□ -1.6
PHGDHO43175 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHGDHO43175 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PHGDHO43175 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHGDHO43175 Y_RNA.18-201ENST00000362461 102 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 RNU6-657P-201ENST00000383904 107 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 RNU6-921P-201ENST00000384361 107 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 MIR143-201ENST00000385300 106 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PHGDHO43175 EI24P3-201ENST00000399046 1062 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 AL078599.1-201ENST00000402075 293 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 AL450338.1-201ENST00000407987 512 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.03□□□□□ -1.6
PHGDHO43175 AC108075.1-201ENST00000424692 529 ntBASIC5.03□□□□□ -1.6
PHGDHO43175 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms