Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TO15178 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TO15178 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.33□□□□□ -1.72
TO15178 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.33□□□□□ -1.72
TO15178 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TO15178 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TO15178 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TO15178 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TO15178 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TO15178 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TO15178 MFSD8-220ENST00000641243 1422 ntBASIC4.32□□□□□ -1.72
TO15178 AC018529.3-201ENST00000624212 2254 ntBASIC4.32□□□□□ -1.72
TO15178 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TO15178 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.32□□□□□ -1.72
TO15178 ZNF29P-201ENST00000225587 168 ntBASIC4.32□□□□□ -1.72
TO15178 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TO15178 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TO15178 RNU1-83P-201ENST00000363426 164 ntBASIC4.32□□□□□ -1.72
TO15178 RNU1-87P-201ENST00000363727 170 ntBASIC4.32□□□□□ -1.72
TO15178 RN7SKP103-201ENST00000363848 320 ntBASIC4.32□□□□□ -1.72
TO15178 RNVU1-6-201ENST00000364688 164 ntBASIC4.32□□□□□ -1.72
TO15178 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.32□□□□□ -1.72
TO15178 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TO15178 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TO15178 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.32□□□□□ -1.72
TO15178 NANOGP5-201ENST00000424456 877 ntBASIC4.32□□□□□ -1.72
TO15178 USP12PY-201ENST00000427677 1064 ntBASIC4.32□□□□□ -1.72
TO15178 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.32□□□□□ -1.72
TO15178 USP9YP24-201ENST00000434374 697 ntBASIC4.32□□□□□ -1.72
TO15178 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.32□□□□□ -1.72
TO15178 ELOCP11-201ENST00000436690 332 ntBASIC4.32□□□□□ -1.72
TO15178 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.32□□□□□ -1.72
TO15178 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.32□□□□□ -1.72
TO15178 ELOCP16-201ENST00000444494 332 ntBASIC4.32□□□□□ -1.72
TO15178 USP9YP17-201ENST00000444617 696 ntBASIC4.32□□□□□ -1.72
TO15178 HMGB3P6-201ENST00000444896 598 ntBASIC4.32□□□□□ -1.72
TO15178 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.32□□□□□ -1.72
TO15178 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TO15178 RPL36AP41-201ENST00000493820 306 ntBASIC4.32□□□□□ -1.72
TO15178 AC113420.1-201ENST00000507903 571 ntBASIC4.32□□□□□ -1.72
TO15178 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.32□□□□□ -1.72
TO15178 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.32□□□□□ -1.72
TO15178 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.32□□□□□ -1.72
TO15178 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.32□□□□□ -1.72
TO15178 RNA5SP497-201ENST00000516081 97 ntBASIC4.32□□□□□ -1.72
TO15178 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.32□□□□□ -1.72
TO15178 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.32□□□□□ -1.72
TO15178 MTCO3P15-201ENST00000526563 574 ntBASIC4.32□□□□□ -1.72
TO15178 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.32□□□□□ -1.72
TO15178 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.32□□□□□ -1.72
TO15178 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.32□□□□□ -1.72
TO15178 MIR4270-201ENST00000581799 70 ntBASIC4.32□□□□□ -1.72
TO15178 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
TO15178 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TO15178 AC068790.7-201ENST00000602347 528 ntBASIC4.32□□□□□ -1.72
TO15178 RNF138P2-201ENST00000603490 592 ntBASIC4.32□□□□□ -1.72
TO15178 AC115621.1-201ENST00000604653 858 ntBASIC4.32□□□□□ -1.72
TO15178 RNU4-5P-201ENST00000607255 135 ntBASIC4.32□□□□□ -1.72
TO15178 AL078595.3-201ENST00000623815 1166 ntBASIC4.32□□□□□ -1.72
TO15178 AL109659.3-201ENST00000624985 950 ntBASIC4.32□□□□□ -1.72
TO15178 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TO15178 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TO15178 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TO15178 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.32□□□□□ -1.72
TO15178 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.32□□□□□ -1.72
TO15178 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TO15178 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TO15178 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.32□□□□□ -1.72
TO15178 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
TO15178 AL672167.1-205ENST00000641112 3080 ntBASIC4.32□□□□□ -1.72
TO15178 AP000542.2-201ENST00000623199 6179 ntBASIC4.32□□□□□ -1.72
TO15178 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TO15178 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TO15178 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.31□□□□□ -1.72
TO15178 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.31□□□□□ -1.72
TO15178 RNU4-51P-201ENST00000364206 140 ntBASIC4.31□□□□□ -1.72
TO15178 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TO15178 Z98745.1-201ENST00000402553 494 ntBASIC4.31□□□□□ -1.72
TO15178 MTCO2P31-201ENST00000402702 684 ntBASIC4.31□□□□□ -1.72
TO15178 AL080315.1-201ENST00000406055 466 ntBASIC4.31□□□□□ -1.72
TO15178 AL603766.1-201ENST00000407763 664 ntBASIC4.31□□□□□ -1.72
TO15178 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.31□□□□□ -1.72
TO15178 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.31□□□□□ -1.72
TO15178 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.31□□□□□ -1.72
TO15178 MTCO2P17-201ENST00000424336 677 ntBASIC4.31□□□□□ -1.72
TO15178 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TO15178 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.31□□□□□ -1.72
TO15178 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.31□□□□□ -1.72
TO15178 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.31□□□□□ -1.72
TO15178 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.31□□□□□ -1.72
TO15178 NPM1P13-201ENST00000452663 865 ntBASIC4.31□□□□□ -1.72
TO15178 SBDSP1-204ENST00000453858 737 ntBASIC4.31□□□□□ -1.72
TO15178 NAP1L1P3-201ENST00000462291 880 ntBASIC4.31□□□□□ -1.72
TO15178 AC020898.1-201ENST00000474167 787 ntBASIC4.31□□□□□ -1.72
TO15178 IGLV2-34-201ENST00000490007 283 ntBASIC4.31□□□□□ -1.72
TO15178 RPL30P11-201ENST00000495304 339 ntBASIC4.31□□□□□ -1.72
TO15178 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.31□□□□□ -1.72
TO15178 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.31□□□□□ -1.72
TO15178 AC118282.2-201ENST00000508739 374 ntBASIC4.31□□□□□ -1.72
TO15178 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms