Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MIR6730-201ENST00000622213 67 ntBASIC4□□□□□ -1.77
LSM1O15116 AC015726.3-201ENST00000624501 418 ntBASIC4□□□□□ -1.77
LSM1O15116 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4□□□□□ -1.77
LSM1O15116 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4□□□□□ -1.77
LSM1O15116 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4□□□□□ -1.77
LSM1O15116 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4□□□□□ -1.77
LSM1O15116 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LSM1O15116 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
LSM1O15116 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LSM1O15116 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4□□□□□ -1.77
LSM1O15116 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LSM1O15116 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.99□□□□□ -1.77
LSM1O15116 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LSM1O15116 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LSM1O15116 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LSM1O15116 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LSM1O15116 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LSM1O15116 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
LSM1O15116 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.99□□□□□ -1.77
LSM1O15116 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.99□□□□□ -1.77
LSM1O15116 AL732292.1-201ENST00000426692 226 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AL160175.1-201ENST00000428124 247 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.99□□□□□ -1.77
LSM1O15116 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 MRPS33P4-201ENST00000434892 317 ntBASIC3.99□□□□□ -1.77
LSM1O15116 TPTE2P1-204ENST00000435256 593 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.99□□□□□ -1.77
LSM1O15116 AC009263.1-201ENST00000441193 1239 ntBASIC3.99□□□□□ -1.77
LSM1O15116 TPTE2P3-201ENST00000441562 1189 ntBASIC3.99□□□□□ -1.77
LSM1O15116 RPL36AP13-201ENST00000457490 317 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AC109327.1-201ENST00000471666 403 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 RPL35P6-201ENST00000490024 372 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AP001086.1-201ENST00000494882 321 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.99□□□□□ -1.77
LSM1O15116 IGKV2-38-201ENST00000517443 247 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.99□□□□□ -1.77
LSM1O15116 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.99□□□□□ -1.77
LSM1O15116 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 AL592436.1-201ENST00000605135 558 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AC010680.4-201ENST00000605334 543 ntBASIC3.99□□□□□ -1.77
LSM1O15116 AC073111.2-201ENST00000605657 1075 ntBASIC3.99□□□□□ -1.77
LSM1O15116 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 AC084036.1-201ENST00000609190 508 ntBASIC3.99□□□□□ -1.77
LSM1O15116 Mico1.1-201ENST00000611698 204 ntBASIC3.99□□□□□ -1.77
LSM1O15116 CR392039.4-201ENST00000624968 501 ntBASIC3.99□□□□□ -1.77
LSM1O15116 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LSM1O15116 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
LSM1O15116 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM1O15116 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM1O15116 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.98□□□□□ -1.77
LSM1O15116 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LSM1O15116 FAM3C2-201ENST00000312214 681 ntBASIC3.98□□□□□ -1.77
LSM1O15116 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.98□□□□□ -1.77
LSM1O15116 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.98□□□□□ -1.77
LSM1O15116 PGBD4P8-201ENST00000412993 562 ntBASIC3.98□□□□□ -1.77
LSM1O15116 RBMY2KP-201ENST00000418221 992 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AC244453.4-201ENST00000419150 388 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.98□□□□□ -1.77
LSM1O15116 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM1O15116 ARF4P2-201ENST00000430209 526 ntBASIC3.98□□□□□ -1.77
LSM1O15116 UBE2V2P3-201ENST00000433562 437 ntBASIC3.98□□□□□ -1.77
LSM1O15116 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.98□□□□□ -1.77
LSM1O15116 TPMTP4-201ENST00000450749 678 ntBASIC3.98□□□□□ -1.77
LSM1O15116 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LSM1O15116 CFTRP1-201ENST00000456646 183 ntBASIC3.98□□□□□ -1.77
LSM1O15116 RN7SL330P-201ENST00000469709 307 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AL049830.2-201ENST00000480072 201 ntBASIC3.98□□□□□ -1.77
LSM1O15116 SUMO1P1-201ENST00000497904 306 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AC093824.1-201ENST00000508796 343 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AC008958.1-201ENST00000511047 682 ntBASIC3.98□□□□□ -1.77
LSM1O15116 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM1O15116 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.98□□□□□ -1.77
LSM1O15116 AL049870.4-201ENST00000555741 486 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.98□□□□□ -1.77
LSM1O15116 AC079171.1-201ENST00000568788 914 ntBASIC3.98□□□□□ -1.77
LSM1O15116 MTND4LP24-201ENST00000572277 291 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM1O15116 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM1O15116 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM1O15116 AC090525.3-201ENST00000605601 189 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.98□□□□□ -1.77
LSM1O15116 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM1O15116 MIR486-1-201ENST00000612171 68 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AC009032.1-201ENST00000617574 431 ntBASIC3.98□□□□□ -1.77
LSM1O15116 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM1O15116 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM1O15116 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM1O15116 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM1O15116 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LSM1O15116 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM1O15116 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM1O15116 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM1O15116 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM1O15116 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
LSM1O15116 AC138393.1-206ENST00000540997 1886 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms