Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC28A1O00337 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SLC28A1O00337 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SLC28A1O00337 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC28A1O00337 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC28A1O00337 AC114814.2-201ENST00000419195 485 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AL356387.2-201ENST00000422272 243 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC28A1O00337 AC011998.1-201ENST00000433403 117 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC006466.1-201ENST00000438721 289 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AL772161.1-201ENST00000439130 476 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC009263.1-201ENST00000441193 1239 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC104306.1-201ENST00000449702 371 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 MRPL35P4-201ENST00000453682 566 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AL513533.1-201ENST00000453728 415 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 RPL23AP81-201ENST00000455252 467 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC28A1O00337 RPL23AP2-201ENST00000471227 466 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC104689.1-201ENST00000473356 768 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC006517.1-201ENST00000480485 328 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 RPL32P9-201ENST00000487963 407 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC28A1O00337 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC28A1O00337 OR5H4P-201ENST00000510851 923 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 RN7SKP82-201ENST00000516786 223 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC28A1O00337 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC28A1O00337 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC28A1O00337 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC28A1O00337 CR383656.14-201ENST00000551951 406 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AL442163.2-201ENST00000553912 710 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC095057.3-201ENST00000567102 1157 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC28A1O00337 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC28A1O00337 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC28A1O00337 AL139395.1-201ENST00000603662 160 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC28A1O00337 AL354984.3-201ENST00000604803 325 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC113403.1-201ENST00000604910 193 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC120053.1-201ENST00000607706 736 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC112503.2-201ENST00000609005 552 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AL049539.1-201ENST00000611964 459 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC026368.1-201ENST00000614934 690 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 AC018926.3-201ENST00000618841 406 ntBASIC4.11□□□□□ -1.75
SLC28A1O00337 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC28A1O00337 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SLC28A1O00337 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SLC28A1O00337 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC28A1O00337 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SLC28A1O00337 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC28A1O00337 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SLC28A1O00337 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
SLC28A1O00337 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC28A1O00337 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC28A1O00337 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC28A1O00337 RN7SKP103-201ENST00000363848 320 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 RNA5SP513-201ENST00000364648 118 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SLC28A1O00337 SNORA51.12-201ENST00000384448 134 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 SNORA11C-201ENST00000408532 129 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC28A1O00337 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC28A1O00337 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC28A1O00337 IPMKP1-201ENST00000425988 855 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC28A1O00337 AL512637.2-201ENST00000431287 1256 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 YWHAEP5-201ENST00000431545 765 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC28A1O00337 FABP5P3-201ENST00000437960 408 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 UBE2V1P5-201ENST00000440070 405 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 AC073264.2-201ENST00000448886 166 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC28A1O00337 RAD23BP3-201ENST00000454157 1152 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC28A1O00337 AC073522.1-201ENST00000483312 377 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 TPT1P3-201ENST00000492841 512 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC28A1O00337 AC110792.2-201ENST00000510278 224 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 RPL7L1P13-201ENST00000511702 739 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC28A1O00337 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.1□□□□□ -1.75
SLC28A1O00337 AC063950.1-201ENST00000552036 308 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC28A1O00337 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC28A1O00337 OR1AB1P-201ENST00000585564 761 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 AC067852.4-201ENST00000590314 478 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 MTATP6P2-201ENST00000603319 678 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 AC021851.1-201ENST00000608537 1082 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms