Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CACNB4O00305 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CACNB4O00305 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CACNB4O00305 AC026951.1-201ENST00000559530 2459 ntBASIC4.37□□□□□ -1.71
CACNB4O00305 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.37□□□□□ -1.71
CACNB4O00305 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CACNB4O00305 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CACNB4O00305 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.36□□□□□ -1.71
CACNB4O00305 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CACNB4O00305 MIR16-2-201ENST00000362117 81 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 MIR331-201ENST00000362302 94 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 RNU6-543P-201ENST00000362576 108 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.36□□□□□ -1.71
CACNB4O00305 ATP5F1P6-201ENST00000402768 767 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 SNORA11F-201ENST00000408237 128 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 RNU2-6P-201ENST00000411404 190 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CACNB4O00305 PRELID3BP11-201ENST00000414230 479 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNB4O00305 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNB4O00305 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNB4O00305 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNB4O00305 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CACNB4O00305 AC105402.2-201ENST00000438503 358 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AC114495.1-201ENST00000441274 436 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 YWHAQP9-201ENST00000445891 512 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNB4O00305 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.36□□□□□ -1.71
CACNB4O00305 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNB4O00305 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNB4O00305 PARP4P3-201ENST00000510265 317 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 FTH1P9-201ENST00000513251 355 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 RNA5SP446-201ENST00000515955 82 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 HMGB1P23-201ENST00000518743 568 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AC134698.5-201ENST00000519444 336 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 COX6B1P6-201ENST00000522347 255 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNB4O00305 UBTFL9-201ENST00000534504 1148 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 TOMM20P2-201ENST00000540082 421 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNB4O00305 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNB4O00305 AC106734.1-201ENST00000568646 663 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 VN1R79P-201ENST00000593540 513 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AC079587.1-201ENST00000603846 277 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AL590392.1-201ENST00000604960 446 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 ARF4P1-201ENST00000605447 541 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AL713922.2-201ENST00000619384 716 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CACNB4O00305 MTND4P26-201ENST00000415971 1359 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 AC095050.2-201ENST00000510748 1458 ntBASIC4.36□□□□□ -1.71
CACNB4O00305 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.36□□□□□ -1.71
CACNB4O00305 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CACNB4O00305 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNB4O00305 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
CACNB4O00305 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNB4O00305 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CACNB4O00305 ZNF33CP-201ENST00000432492 2030 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNB4O00305 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNB4O00305 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNB4O00305 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNB4O00305 UBTFL3-201ENST00000418934 1024 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 RSL24D1P6-201ENST00000426934 401 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC092017.2-201ENST00000427600 362 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 ETF1P3-201ENST00000430422 1160 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC023347.2-201ENST00000433994 462 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.35□□□□□ -1.71
CACNB4O00305 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNB4O00305 RPL21P133-201ENST00000443666 476 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.35□□□□□ -1.71
CACNB4O00305 DDX39BP2-208ENST00000453923 258 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 UBTFL6-201ENST00000477929 1024 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC020593.1-201ENST00000507399 299 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.35□□□□□ -1.71
CACNB4O00305 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNB4O00305 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNB4O00305 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.35□□□□□ -1.71
CACNB4O00305 AC090281.1-201ENST00000523019 276 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 PTP4A1P6-201ENST00000531034 478 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.35□□□□□ -1.71
CACNB4O00305 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNB4O00305 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNB4O00305 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNB4O00305 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CACNB4O00305 AC090181.2-201ENST00000602975 672 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC092653.1-201ENST00000608509 531 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC105429.2-201ENST00000610567 517 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC023043.4-201ENST00000612081 449 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 MIR6891-201ENST00000618788 93 ntBASIC4.35□□□□□ -1.71
CACNB4O00305 AC016717.3-201ENST00000624730 554 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms