Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 RNU4-27P-201ENST00000410889 139 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC009237.10-201ENST00000414112 510 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 RPL17P36-201ENST00000420302 549 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC062016.2-201ENST00000420950 676 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 PNRC2P1-201ENST00000423940 420 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC005189.1-201ENST00000431286 310 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 ARL5AP2-201ENST00000444698 533 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC053481.1-201ENST00000467217 306 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC105137.1-201ENST00000484355 562 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 MTCO1P35-201ENST00000515270 228 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 MTND2P7-201ENST00000521337 640 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 COX6B1P6-201ENST00000522347 255 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 CYCSP29-201ENST00000533731 318 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 UBTFL9-201ENST00000534504 1148 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 RPL21P7-201ENST00000557463 483 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 MIR4458-201ENST00000578872 75 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC095038.2-201ENST00000621464 1070 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 AC083865.1-201ENST00000636634 831 ntBASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA2E9PIF3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 EOGT-210ENST00000615922 1931 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC008033.1-201ENST00000216407 1162 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 MIR331-201ENST00000362302 94 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 SNORA70C-201ENST00000384538 135 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 SNORD96B-201ENST00000386148 79 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 ATP5F1P6-201ENST00000402768 767 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 RNA5SP146-201ENST00000410743 123 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 UBE2V1P11-201ENST00000411559 285 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 AL160275.2-201ENST00000412010 394 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 RPL23AP26-201ENST00000412728 464 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC004022.2-201ENST00000413824 193 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 VN1R42P-201ENST00000424651 344 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 RPS27AP12-201ENST00000429552 465 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC012158.1-204ENST00000483430 465 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 RNA5SP446-201ENST00000515955 82 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA2E9PIF3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA2E9PIF3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC007224.1-201ENST00000564410 144 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC090751.1-201ENST00000566966 267 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC012254.4-201ENST00000588843 273 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 RPL7P50-201ENST00000600588 727 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 uc_338.32-201ENST00000615087 172 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 SNX18P1Y-201ENST00000616231 511 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 AL445567.2-201ENST00000618935 498 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 ATE1-AS1-202ENST00000636460 506 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA2E9PIF3 AC017104.4-201ENST00000636283 1592 ntBASIC4□□□□□ -1.77
NPIPA2E9PIF3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA2E9PIF3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA2E9PIF3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NPIPA2E9PIF3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC090229.1-201ENST00000590983 1609 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms