Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LSM6P2-201ENST00000552208 177 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 PSMA3P-201ENST00000555485 635 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC005332.4-201ENST00000592752 579 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL133255.1-201ENST00000606374 441 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC233309.1-201ENST00000619522 751 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC009248.2-201ENST00000619826 254 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL137067.2-201ENST00000621202 131 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC005858.4-201ENST00000623191 700 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC091953.2-201ENST00000623979 160 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 RBPJP6-201ENST00000411556 1431 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 AL136984.1-201ENST00000607611 1893 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 KPNA2P2-201ENST00000419546 1489 ntBASIC5.39□□□□□ -1.55
SHISA3A0PJX4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.39□□□□□ -1.55
SHISA3A0PJX4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AL161781.1-201ENST00000354277 403 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 Y_RNA.474-201ENST00000384341 102 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 RNU6-441P-201ENST00000384545 106 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 ARF4P3-201ENST00000397387 509 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 TXNP7-201ENST00000406296 293 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 MTCO3P12-201ENST00000416718 547 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AL807761.1-201ENST00000417622 171 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 RPS7P14-201ENST00000426405 583 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC018644.1-201ENST00000429934 551 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AL356133.1-201ENST00000444762 372 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC079781.2-201ENST00000446424 169 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AL445466.1-201ENST00000448432 357 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 RPL7P39-201ENST00000481157 744 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC103851.1-201ENST00000506833 274 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 TXNP6-201ENST00000510190 310 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 NPM1P41-201ENST00000512920 831 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC091932.1-201ENST00000569381 427 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC005668.1-201ENST00000571142 476 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 RPL29P33-201ENST00000587474 316 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 OR7E19P-202ENST00000589942 844 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 KC877982.1-201ENST00000602313 470 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC113139.1-201ENST00000605049 239 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 BX323046.1-201ENST00000610145 535 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC105429.2-201ENST00000610567 517 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AL356585.4-201ENST00000623078 1229 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC092125.1-201ENST00000562568 1995 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 RBPJP2-201ENST00000618187 1444 ntBASIC5.38□□□□□ -1.55
SHISA3A0PJX4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms