Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC090017.1-201ENST00000548612 1779 ntBASIC8.65□□□□□ -1.02
TRIM35Q9UPQ4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM35Q9UPQ4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC8.65□□□□□ -1.03
TRIM35Q9UPQ4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM35Q9UPQ4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.65□□□□□ -1.03
TRIM35Q9UPQ4 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
TRIM35Q9UPQ4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC027287.1-201ENST00000553115 1453 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC097504.1-201ENST00000515103 2415 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 MRPS6P2-201ENST00000381143 370 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 UBE2V1P2-201ENST00000397758 440 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AL359092.1-201ENST00000417156 265 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC137499.1-201ENST00000427602 88 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 RPEP4-201ENST00000437636 602 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 RN7SL66P-201ENST00000582099 264 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC012669.1-201ENST00000603209 283 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC011891.2-201ENST00000604949 397 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AL355365.1-201ENST00000616480 294 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 uc_338.34-201ENST00000617467 174 ntBASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM35Q9UPQ4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 ANAPC1P1-201ENST00000426186 2145 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC122713.2-201ENST00000624942 3335 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 RNU6-493P-201ENST00000391321 108 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 RNU6-1050P-201ENST00000410388 107 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 RNU2-29P-201ENST00000410423 189 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AL929472.1-201ENST00000417484 429 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 Z82198.3-201ENST00000421145 199 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC115283.1-201ENST00000427353 400 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 YRDCP3-201ENST00000456507 480 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC022215.1-201ENST00000481770 362 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC008526.1-201ENST00000509149 338 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 Y_RNA.670-201ENST00000516255 105 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 HAUS8P1-201ENST00000549005 542 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 RN7SL366P-201ENST00000577957 292 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 MIR4732-201ENST00000581873 76 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC074141.1-201ENST00000588129 2995 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 AC092821.2-201ENST00000545710 2042 ntBASIC8.63□□□□□ -1.03
TRIM35Q9UPQ4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 OR55B1P-203ENST00000641518 2602 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 RNY1P5-201ENST00000383890 115 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AL133260.1-201ENST00000405720 405 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 Y_RNA.793-201ENST00000411222 111 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 UBE2V1P5-201ENST00000440070 405 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AC020550.1-201ENST00000447385 163 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AL445991.1-201ENST00000450381 475 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms