Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AL139811.1-201ENST00000424779 2299 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 ZNF90P1-201ENST00000480493 1951 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 SPRR2C-201ENST00000290702 219 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 RNU2-17P-201ENST00000410290 190 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 DYNLL1P7-201ENST00000429273 258 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 PTP4A1P3-201ENST00000433661 420 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 UBE2V1P3-201ENST00000439651 417 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 BTBD7P2-201ENST00000441962 620 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC108729.2-201ENST00000476543 840 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 RPL35P6-201ENST00000490024 372 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 STMN1P2-201ENST00000508435 439 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC008958.1-201ENST00000511047 682 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC008694.2-201ENST00000517591 306 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 OR5BC1P-201ENST00000529327 739 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC074050.1-201ENST00000563247 211 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC106785.3-201ENST00000564064 847 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC106785.1-201ENST00000565935 262 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 MIR4512-201ENST00000583257 77 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC004775.1-201ENST00000607389 753 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 MIR1264-201ENST00000616374 69 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC023509.5-201ENST00000617434 807 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AC090506.2-201ENST00000624521 419 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AL356121.2-201ENST00000624715 780 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 RNA5SP196-201ENST00000625967 102 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AL163152.1-201ENST00000642001 374 ntBASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NPIPA1Q9UND3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC067945.1-201ENST00000342609 618 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 RNA5SP175-201ENST00000364275 119 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 RNU1-13P-201ENST00000384499 162 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AL161909.1-201ENST00000397390 712 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 RN7SKP167-201ENST00000411047 285 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 LINC01347-201ENST00000417964 355 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 BX119904.1-201ENST00000432026 348 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 ELOCP11-201ENST00000436690 332 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC097499.1-201ENST00000444277 208 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 ELOCP16-201ENST00000444494 332 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC089999.1-201ENST00000460336 374 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 PPM1AP1-201ENST00000502740 1135 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 VWA8P1-201ENST00000510889 176 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 RNA5SP49-201ENST00000516450 115 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC103833.1-201ENST00000517442 172 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 SNRPGP1-201ENST00000553864 222 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 OR4U1P-201ENST00000554958 912 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC233266.2-201ENST00000567067 528 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 MTND4LP24-201ENST00000572277 291 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AL118556.2-201ENST00000614375 824 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AC107308.1-201ENST00000615897 301 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 MIR8059-201ENST00000620427 81 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 MIR492-201ENST00000638676 116 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms