Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 RNA5SP235-201ENST00000365411 114 ntBASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 RPL36AP10-201ENST00000421785 322 ntBASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 RPS15AP29-201ENST00000445539 400 ntBASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 RNU1-41P-201ENST00000516161 162 ntBASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 RNU1-48P-201ENST00000516400 162 ntBASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 VN1R78P-201ENST00000597393 564 ntBASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 AP003392.5-201ENST00000607857 415 ntBASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 AC087241.4-201ENST00000612441 480 ntBASIC5.84□□□□□ -1.47
RIMBP3Q9UFD9 AC104446.1-201ENST00000613728 1321 ntBASIC5.84□□□□□ -1.48
RIMBP3Q9UFD9 HSPD1P14-201ENST00000432666 1618 ntBASIC5.84□□□□□ -1.48
RIMBP3Q9UFD9 AC018529.3-201ENST00000624212 2254 ntBASIC5.84□□□□□ -1.48
RIMBP3Q9UFD9 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RIMBP3Q9UFD9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 RNU4-82P-201ENST00000362443 140 ntBASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 AL035407.1-201ENST00000429211 571 ntBASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 RPL23AP89-201ENST00000439324 255 ntBASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 UBL5P3-201ENST00000475112 231 ntBASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 AC026801.2-201ENST00000515352 425 ntBASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 AC104662.1-201ENST00000604448 511 ntBASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIMBP3Q9UFD9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 AC007685.1-201ENST00000329806 452 ntBASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 RPS20P22-201ENST00000473700 357 ntBASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 RNA5SP208-201ENST00000516156 78 ntBASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 AC090151.1-201ENST00000520784 730 ntBASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIMBP3Q9UFD9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 RNA5SP247-201ENST00000411181 105 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 RPS23P10-201ENST00000416185 486 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 SETP9-201ENST00000423837 832 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AL133477.1-201ENST00000457472 514 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 SAMMSON-213ENST00000641336 1521 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AP000432.2-201ENST00000624164 2048 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AL445529.1-201ENST00000398713 389 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 MRPS33P4-201ENST00000434892 317 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AC097262.1-201ENST00000452559 548 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AC008011.1-201ENST00000545989 227 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 RPL21P7-201ENST00000557463 483 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 MIR7851-201ENST00000610611 160 ntBASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.81□□□□□ -1.48
RIMBP3Q9UFD9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 HMGB1P37-201ENST00000439613 609 ntBASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 AC000041.1-201ENST00000439655 175 ntBASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 AC091544.4-201ENST00000555268 342 ntBASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 AC073657.2-201ENST00000605661 303 ntBASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIMBP3Q9UFD9 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms