Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 MTCYBP13-201ENST00000578634 1093 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC127024.5-201ENST00000580085 462 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 MIR4666A-201ENST00000580160 79 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 VN1R90P-201ENST00000595717 726 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL031985.2-201ENST00000600955 480 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL163642.2-201ENST00000604722 1019 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC090246.1-201ENST00000616499 426 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC067931.1-201ENST00000624190 671 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 MIR4278-201ENST00000636094 69 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC087821.2-201ENST00000637086 450 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL356489.2-201ENST00000566968 3528 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 MAPK10-304ENST00000641341 3984 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 MTCO1P6-201ENST00000481192 1384 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC090017.1-201ENST00000548612 1779 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 Y_RNA.194-201ENST00000363985 102 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AL021407.1-201ENST00000404531 386 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AL390316.1-201ENST00000406279 553 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 GJA6P-201ENST00000415117 1042 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 DPY19L1P2-201ENST00000426647 915 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 ELOCP8-201ENST00000439309 332 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 ELOCP15-201ENST00000442090 332 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 MTCO2P3-201ENST00000442543 421 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 MTCYBP3-201ENST00000445588 1137 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AL354714.3-201ENST00000447284 493 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 PPIAP21-201ENST00000464473 501 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC104971.1-201ENST00000495117 578 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC093755.1-201ENST00000512950 1023 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 MTND5P13-201ENST00000513046 1079 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC090515.3-201ENST00000560431 315 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC018552.3-201ENST00000567416 561 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 MIR4691-201ENST00000583764 85 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 MIR4999-201ENST00000585029 91 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 BNIP3P26-201ENST00000600827 554 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC010738.1-201ENST00000604970 987 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC133644.2-201ENST00000608142 540 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AL353600.1-201ENST00000608148 251 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AL627230.1-201ENST00000613077 211 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC116447.1-201ENST00000613153 453 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 EIF3FP1-201ENST00000613970 806 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AL591926.8-201ENST00000616876 211 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC091931.1-201ENST00000623488 728 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 AC074029.4-201ENST00000624796 1859 ntBASIC5.13□□□□□ -1.59
DKK3Q9UBP4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
DKK3Q9UBP4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AP000776.1-201ENST00000530032 1663 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms