Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC090502.2-201ENST00000549267 280 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 LSM3P2-201ENST00000551246 273 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 VN1R82P-201ENST00000601481 356 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC007490.1-201ENST00000624321 703 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AC006206.1-201ENST00000544842 3387 ntBASIC4.8□□□□□ -1.64
LRFN1Q9P244 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
LRFN1Q9P244 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN1Q9P244 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 LINC01109-201ENST00000603837 3081 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 EIF2AP4-201ENST00000424793 1781 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 RNA5SP90-201ENST00000364801 99 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 RN7SKP153-201ENST00000365026 316 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 RNU6-657P-201ENST00000383904 107 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 SSXP10-201ENST00000402595 565 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 SETP15-201ENST00000412724 337 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC004987.3-201ENST00000413879 771 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC062016.2-201ENST00000420950 676 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 RBMY2QP-201ENST00000429799 1147 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC006466.1-201ENST00000438721 289 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 CEACAMP9-201ENST00000442990 513 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC023271.1-201ENST00000445936 1090 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 CBX1P2-201ENST00000453841 458 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 RPL37P6-202ENST00000464216 403 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC097484.1-201ENST00000471148 389 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 SETP14-201ENST00000497538 873 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC021146.8-201ENST00000507455 733 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AP003461.1-201ENST00000528866 78 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 ZNF705CP-201ENST00000530515 889 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 PTP4A1P6-201ENST00000531034 478 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 CR383656.6-201ENST00000550518 394 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 MRPS36P5-201ENST00000551909 298 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 LSM6P2-201ENST00000552208 177 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 AL162431.4-201ENST00000604674 411 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 EIF3FP1-201ENST00000613970 806 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN1Q9P244 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN1Q9P244 THAP12P4-201ENST00000528321 2266 ntBASIC4.79□□□□□ -1.64
LRFN1Q9P244 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms