Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 Y_RNA.672-201ENST00000516289 104 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC090502.2-201ENST00000549267 280 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 HIF1AP1-201ENST00000553642 175 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC034268.2-201ENST00000571784 482 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC007621.1-201ENST00000604544 437 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AP000942.4-201ENST00000604811 241 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC093788.1-201ENST00000609356 927 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AL161734.1-201ENST00000609720 557 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AP006248.2-201ENST00000623309 592 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 SAMMSON-227ENST00000642114 1199 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNTN3Q9P232 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNTN3Q9P232 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CNTN3Q9P232 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNTN3Q9P232 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNTN3Q9P232 RNU4-79P-201ENST00000362764 141 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 RNY3P3-201ENST00000363816 102 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CNTN3Q9P232 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL445669.1-201ENST00000426743 755 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC099677.3-201ENST00000427081 395 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC016027.5-201ENST00000427227 210 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL162739.1-201ENST00000450606 307 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AP006222.1-205ENST00000450734 457 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 RPS20P20-201ENST00000460498 340 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC007998.1-201ENST00000474156 672 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC114967.1-201ENST00000504890 259 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 SNORD46.2-201ENST00000516021 102 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AF279873.1-201ENST00000523393 313 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC090424.1-201ENST00000535243 736 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 MIR3614-201ENST00000581261 86 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL161729.3-201ENST00000603533 673 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL136363.1-201ENST00000605349 337 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AL050343.2-201ENST00000607338 280 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 RNU6-87P-201ENST00000607561 108 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 uc_338.26-201ENST00000612659 160 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 MTCO1P7-201ENST00000419523 1542 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNTN3Q9P232 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.43□□□□□ -1.38
CNTN3Q9P232 CASC19-221ENST00000641309 1382 ntBASIC6.43□□□□□ -1.38
CNTN3Q9P232 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 RNA5SP510-201ENST00000364697 99 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms