Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC115286.1-201ENST00000604298 434 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC243654.2-201ENST00000612843 443 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC017037.3-201ENST00000625016 472 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC133552.1-201ENST00000569988 4007 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 MAPK10-263ENST00000641052 4307 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AL031119.1-201ENST00000404707 1879 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 RAD17P1-201ENST00000418130 2042 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL034370.1-201ENST00000397254 1590 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 ZNF137P-201ENST00000456718 1920 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 RNA5SP447-201ENST00000363749 119 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 RNU6-83P-201ENST00000384568 112 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 GSTA8P-201ENST00000404253 637 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 RNU2-6P-201ENST00000411404 190 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 TMBIM7P-201ENST00000418074 855 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 CHIAP3-201ENST00000423668 1133 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 GTF2IP23-201ENST00000423746 351 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 MTCO1P54-201ENST00000430139 712 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC079776.3-201ENST00000450665 370 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC243772.1-201ENST00000451620 410 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 NECAP1P2-201ENST00000455668 727 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL20A1Q9P218 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 SCARNA10-201ENST00000459255 330 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC090142.1-201ENST00000465776 462 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 DYNLL1P6-201ENST00000503440 264 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 NDUFB4P12-201ENST00000513465 390 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC007834.2-201ENST00000536310 343 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL359219.2-201ENST00000555184 348 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 MIR4660-201ENST00000583549 74 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 BNIP3P26-201ENST00000600827 554 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL133338.2-201ENST00000604292 736 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 AP000255.1-201ENST00000610276 676 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AC105227.2-201ENST00000615075 605 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL20A1Q9P218 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.29□□□□□ -1.56
COL20A1Q9P218 OR56B2P-202ENST00000641377 2453 ntBASIC5.29□□□□□ -1.56
COL20A1Q9P218 AL603750.1-201ENST00000624216 1717 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL20A1Q9P218 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL20A1Q9P218 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL20A1Q9P218 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL20A1Q9P218 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC092162.3-201ENST00000624511 1624 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL512646.1-201ENST00000269395 1077 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC017079.1-201ENST00000333650 415 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 SFR1P1-201ENST00000403720 688 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL121878.1-201ENST00000418638 859 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 MFSD13B-201ENST00000420133 1290 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL592293.2-201ENST00000422292 996 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 RPL7AP25-201ENST00000423357 805 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 CKS1BP6-201ENST00000424932 240 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 USP9YP31-201ENST00000431405 881 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC104763.1-201ENST00000475274 360 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC015724.1-201ENST00000478577 156 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AP000926.4-201ENST00000527351 454 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC009643.1-201ENST00000532030 391 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms