Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 AP001005.3-201ENST00000622049 129 ntBASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 OR13C1P-202ENST00000641378 2919 ntBASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCM2LQ9NUG4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RNU1-150P-201ENST00000362491 162 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RNU4-75P-201ENST00000364621 146 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RNA5SP132-201ENST00000364725 118 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RNU6-441P-201ENST00000384545 106 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 MIR649-201ENST00000384843 97 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RNU4-34P-201ENST00000410431 124 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL663109.1-201ENST00000411498 844 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC211486.3-201ENST00000412694 621 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL133384.1-201ENST00000412744 351 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL357752.1-201ENST00000412817 349 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RPL34P3-201ENST00000421454 338 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 CENPIP1-201ENST00000425713 902 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL158073.1-201ENST00000426848 1104 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL353597.2-202ENST00000434901 373 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 TRIM60P18-201ENST00000441518 828 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RPL23AP16-201ENST00000441715 421 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 BMI1P1-201ENST00000445879 941 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 VN1R10P-201ENST00000447106 875 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC002553.2-201ENST00000453217 340 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 GEMIN2P1-201ENST00000454246 752 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AP000893.1-201ENST00000474462 794 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RN7SL570P-201ENST00000484405 292 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RN7SL466P-201ENST00000497546 295 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 MYL12BP2-201ENST00000503948 512 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC006499.2-201ENST00000513470 337 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC022447.1-201ENST00000515358 464 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AP000648.1-201ENST00000529682 397 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 CYCSP28-201ENST00000534284 321 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC008127.2-201ENST00000549925 1075 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL391156.1-201ENST00000554965 554 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC108738.1-201ENST00000603703 237 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 BNIP3P11-201ENST00000603878 563 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC068276.1-201ENST00000605793 379 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 HSPE1P14-201ENST00000605812 302 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AL136131.3-201ENST00000607600 188 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 MIR6809-201ENST00000612189 116 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 AC025048.6-202ENST00000627667 438 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 SAMMSON-227ENST00000642114 1199 ntBASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCM2LQ9NUG4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms