Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC093765.1-201ENST00000603758 881 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AF129408.1-201ENST00000608767 431 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC019131.2-201ENST00000609071 870 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC004948.1-201ENST00000609858 672 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AL161616.1-201ENST00000611867 286 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 MIR6780A-201ENST00000615089 68 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AL035461.2-201ENST00000619201 524 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AL138955.1-201ENST00000622881 1040 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC090506.2-201ENST00000624521 419 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC093311.1-201ENST00000506586 2021 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 SNORD65-201ENST00000391079 73 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 HSPD1P16-201ENST00000402302 394 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 ATP5F1P6-201ENST00000402768 767 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 RPL7AP73-201ENST00000413490 353 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AL121882.1-201ENST00000422893 417 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 CHIAP3-201ENST00000423668 1133 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 NPM1P34-201ENST00000428821 893 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 RPL7P4-203ENST00000430239 730 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AL512637.2-201ENST00000431287 1256 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 MRPL50P1-201ENST00000431951 384 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC006466.1-201ENST00000438721 289 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AL513321.1-201ENST00000441175 761 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 FABP3P2-201ENST00000453169 399 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 LARP7P4-201ENST00000481075 878 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 MTCO2P9-201ENST00000503214 694 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC008958.1-201ENST00000511047 682 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC096947.1-201ENST00000603233 470 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AL356274.1-201ENST00000617064 410 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC244205.2-202ENST00000635781 342 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.89□□□□□ -1.63
UPF2Q9HAU5 AC006504.1-201ENST00000562493 3666 ntBASIC4.89□□□□□ -1.63
UPF2Q9HAU5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 RNU1-18P-201ENST00000363062 164 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AL133270.1-201ENST00000402635 279 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 EIF4A1P3-201ENST00000411521 244 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AMD1P2-201ENST00000412936 992 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 CYP4F29P-201ENST00000420685 446 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 SFR1P2-201ENST00000421841 730 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 HMGB1P37-201ENST00000439613 609 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC073264.2-201ENST00000448886 166 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC022431.1-201ENST00000450941 438 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 CLIC4P1-201ENST00000453177 535 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC104629.2-201ENST00000468627 598 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 SCARNA1-201ENST00000517138 166 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC010476.1-201ENST00000519111 851 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC141257.3-201ENST00000572906 215 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC016597.2-201ENST00000613256 341 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC245389.2-201ENST00000616023 576 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC242843.1-201ENST00000618702 573 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AP001784.1-201ENST00000624107 428 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AP002967.1-201ENST00000624203 539 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms