Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC007599.1-201ENST00000568688 1174 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC104662.1-201ENST00000604448 511 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 MIR6820-201ENST00000611508 62 ntBASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRRC40Q9H9A6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AL161909.1-201ENST00000397390 712 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 CCNB2P1-201ENST00000399411 1150 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 SNORA3C-201ENST00000408792 125 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 RNA5SP306-201ENST00000411087 107 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 RPL23AP26-201ENST00000412728 464 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC006011.1-201ENST00000442758 349 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 CEACAMP9-201ENST00000442990 513 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AL161747.1-201ENST00000480068 358 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 RN7SL459P-201ENST00000481078 302 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 RPL29P14-201ENST00000495837 428 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC139783.2-201ENST00000504847 1145 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC093824.1-201ENST00000508796 343 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC110792.2-201ENST00000510278 224 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC018797.3-201ENST00000513388 1241 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC022784.5-201ENST00000522241 437 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 PTP4A1P6-201ENST00000531034 478 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC009643.1-201ENST00000532030 391 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 NOP56P3-201ENST00000549457 385 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 RPL23AP87-202ENST00000573039 466 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 MIR4277-201ENST00000578298 84 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AP000919.1-202ENST00000581139 1264 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AP003117.2-201ENST00000606010 545 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 AC116667.1-201ENST00000604855 2072 ntBASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LRRC40Q9H9A6 MARK2P15-201ENST00000432204 2186 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 MIR383-201ENST00000362257 73 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AL592293.2-201ENST00000422292 996 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 ELOCP6-201ENST00000429066 328 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 ELOCP12-201ENST00000458706 328 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 RPL7P1-201ENST00000468161 747 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 RPL7P9-201ENST00000468715 747 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 RPS23P1-201ENST00000491662 432 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC012170.1-201ENST00000495139 359 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 RNU7-143P-201ENST00000516781 65 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC079171.1-201ENST00000568788 914 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC012417.1-201ENST00000582307 1039 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC008745.1-201ENST00000604064 271 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 CR589904.2-201ENST00000612533 440 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC114781.5-201ENST00000615297 108 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC245389.2-201ENST00000616023 576 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC090246.1-201ENST00000616499 426 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC243756.2-201ENST00000618406 463 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC242843.1-201ENST00000618702 573 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC095038.2-201ENST00000621464 1070 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC010435.1-201ENST00000623353 1177 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC011944.2-201ENST00000624440 683 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 AC024023.1-201ENST00000624530 922 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 MIR3653-201ENST00000625572 110 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 MTCO1P14-201ENST00000441695 1559 ntBASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms